Sphingobacterium thalpophilum: NCTC11429_03120
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Entry
NCTC11429_03120 CDS
T06778
Symbol
clpC
Name
(GenBank) Negative regulator of genetic competence ClpC/MecB
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
stha
Sphingobacterium thalpophilum
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
stha03110
]
NCTC11429_03120 (clpC)
Chaperones and folding catalysts [BR:
stha03110
]
Heat shock proteins
HSP100
NCTC11429_03120 (clpC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
Sigma54_activat
AAA_16
AAA_22
nSTAND3
AAA_18
IstB_IS21
TniB
AAA_3
UVR
AAA_7
AAA_14
AAA_24
AAA_25
bpMoxR
ATPase_2
NACHT
DUF815
DNA_pol3_delta2
AAA_28
KTI12
Motif
Other DBs
NCBI-ProteinID:
VTR44887
UniProt:
A0A4U9VFV2
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Position
1:complement(3659667..3662195)
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AA seq
842 aa
AA seq
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MEAKFSPRVKDVISYSREEALRLRHDYIGTEHLLLGLIREGDGMAIKILKNIGIDTTALR
QSVEDAVKGASVSRAPIGNMPLTKQAEKVLKITYLEAKIFKSDIIGTEHLLLAILRDEDN
IASQILQQYNVTYDIFKSEVEQNRTSIKDEAPGSPTGGDDDFAEDDQYIQPKKVSDIKSK
TPVLDNFGRDLTKAAEEGRLDPIVGREKEIERVSQILSRRKKNNPLLIGEPGVGKSAIAE
GLALRIVQRKVSRVLFNKRVVTLDLASLVAGTKYRGQFEERMKAVMNELEKSPDVILFID
EIHTIVGAGGASGSLDASNMFKPALARGEIQCIGATTLDEYRQYIEKDGALDRRFQRVTI
EPATHDETVEILNRIKEKYEDHHNVTYTPEAIEACVSLTTRYITDRFLPDKAIDALDEAG
SRVHLNNIHVPQSIIDIENKIEEVKLEKNKVVRSQKYEEAAKLRDTEKKLIEELEKEKIA
WEEETKSKRYTVSEENVAEVVAMMTGIPVQRVSQTDSQKLLNMAELMKGRIIGQDDAVGK
LVKAIQRTRAGLKDPKKPIGSFIFLGPTGVGKTELAKELARFMFDTEDALIQIDMSEYME
KFAVSRLVGAPPGYVGYEEGGQLTEKVRRKPYAVVLLDEIEKAHPDVFNLLLQVLDEGQL
TDSLGRKVDFRNTIIIMTSNIGARQLKEFGQGVGFTTAAKAQQSDAHSRGVIETALKRAF
APEFLNRIDDVIVFNSLTKENIFKIIDIELKSLFKRIADLGYVINLTDEAKDFIADKGYD
SNFGARPLKRAIQKYLEDPIAEEILKGNVQAGSVLTVSINPETKDIEVSSSDPKSSKDTA
EK
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaaaattttcaccgcgcgtaaaggatgtcatatcgtacagtagagaggaagct
ttgagattgcgtcacgactatatcggaacggagcacttgttgctaggattgattcgtgaa
ggcgatggaatggcgatcaaaatcctgaaaaacataggcattgacactacagccctacgt
caatctgtggaggacgcagtgaagggggcatctgtatcacgcgcaccgattggcaatatg
ccattaacaaaacaagctgaaaaagttttaaaaattacgtatttagaagcgaagattttc
aagtcagatattattggaacggagcatttattattggcaatcctgcgggatgaagacaat
attgcttcgcagatattacagcaatataatgtcacttacgacatcttcaagtctgaagta
gagcagaacaggacaagcatcaaggatgaagctcctggttctcctactggtggcgatgac
gattttgcggaagacgatcaatatatccagcccaagaaggtttcggatatcaaatccaag
acgccggtacttgacaactttggtcgcgatctgaccaaagctgcagaggaaggcagactg
gatcctattgtcggccgcgagaaagaaatcgagcgtgtgtctcaaattctatcacgacgc
aagaaaaacaacccgcttttgatcggtgagccgggagtcggtaaatcagcgatagcggag
ggactggcactgcgtatcgtacaacgtaaagtgtcccgtgtactattcaacaaacgggta
gtcactttggatctcgcttccttggtagcaggcacaaagtatcgtggacaatttgaggag
cgcatgaaagccgtcatgaatgagctggaaaaatcaccggatgtgatcttgtttatcgat
gagatccataccattgtcggtgcaggtggagcatcaggctcattggacgcgtccaacatg
ttcaaaccagccttggcaaggggtgagattcagtgcatcggtgctacgacattggatgag
taccgtcagtacattgaaaaagacggcgcattggatcgtcgtttccaacgggtgactatc
gagcctgcgacacatgacgaaactgtggaaatcctgaaccgtatcaaagagaaatatgag
gatcaccacaacgtgacctatacaccagaagcgattgaggcctgtgtgtcgctgaccaca
cgctatattaccgaccgctttttaccggacaaagcgatagacgcattggacgaggccggg
tcacgtgtacacttgaacaatattcatgtaccgcagtccatcattgacatcgagaacaaa
atcgaggaagtcaaattggagaaaaataaggtggtgcgcagccagaaatatgaagaagca
gccaaattgcgcgataccgagaaaaagctgatcgaggaactggaaaaagagaagattgca
tgggaagaggagaccaagtccaaacgctatactgtatcggaagaaaatgtggctgaggtg
gtcgcgatgatgaccggcattccagtgcaacgtgtcagccagaccgacagccagaagcta
ttgaacatggcggagctgatgaaaggccggatcatcggtcaggacgatgccgtgggaaaa
ttggtgaaggctatccagcgcacacgtgctgggctgaaagatccgaaaaaaccgatcggt
tcctttatcttcttaggccctactggtgtaggtaaaactgaattagcgaaggagctggcg
cgcttcatgttcgacacggaggacgccttgatccagatcgatatgagtgagtacatggag
aagtttgctgtttcccgtttggtgggagcgcctccgggatatgtaggttatgaagaaggt
ggtcagctgactgagaaagtacgccgcaaaccttatgctgttgtgctgttggatgagatt
gagaaagctcaccctgacgtgttcaacctattgctacaggtattggatgaaggacaatta
acggatagtctgggccgtaaggtcgatttccgcaacaccattatcatcatgacgtccaac
attggcgcacgtcagttgaaggaatttggtcagggagtcggtttcactaccgcagccaaa
gcacagcagtcggatgcgcattcccgaggtgtgattgagacagcgttgaaacgcgcgttc
gcgccggagtttctgaaccgtattgatgatgtgattgtgttcaactcattgactaaggaa
aacatcttcaagatcattgacattgaattaaaatcgctgttcaaacgcatcgcagacttg
ggctatgtgatcaacttgacggatgaagccaaggatttcattgcggataaaggatacgac
agtaattttggggcacgtccactaaaacgggcaattcaaaaatatctcgaagatccaatt
gctgaagagatccttaaaggcaacgtgcaggccggttcagtattgaccgtaagcattaac
ccagaaaccaaagatatagaggtatctagctcggatccgaagtcttcaaaagatacggca
gagaaataa
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