Sphingobacterium thalpophilum: NCTC11429_03469
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Entry
NCTC11429_03469 CDS
T06778
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
stha
Sphingobacterium thalpophilum
Pathway
stha00300
Lysine biosynthesis
stha00470
D-Amino acid metabolism
stha01100
Metabolic pathways
stha01110
Biosynthesis of secondary metabolites
stha01120
Microbial metabolism in diverse environments
stha01230
Biosynthesis of amino acids
Module
stha_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NCTC11429_03469 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NCTC11429_03469 (lysA)
Enzymes [BR:
stha01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NCTC11429_03469 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
VTR47072
UniProt:
A0A4U9VN57
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All DBs
Position
1:4039909..4041069
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AA seq
386 aa
AA seq
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MINTDIATKFADRETPFYYYDMDVLARTLEAAHEASQKRGFHVHYALKANFNDVLLKRIQ
EIGFGADCVSGNEVRKAIECGFTPQNITFAGVGKSDKEINYALTQQIFAFNVESIQELEV
INELASKQGVKANVALRINPNVDAHTHHYITTGLDENKFGVPNADLEKCASVLKKCEFIE
LVGLHFHVGSQITDMTVFKSLCVKVNEWKNWFEERGTQIRVLNVGGGLGIDYKNPDSNSI
PDFEAYFDIFDRFLERKPYQEVHFELGRALVAQCGSLISRVLYVKNGVKKNFLVLDAGMT
ELMRPALYQAYHKIENLSAVETEESLNYDVVGPICESSDCFGKEVPLPDSGRGDLIAIRS
AGAYGEVMASRYNLREEIRFVYSDQL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgattaatacagatattgcaacaaaatttgctgacagagagacaccattttactactac
gatatggatgtgctggcacggaccttggaggcagcgcatgaagcatcgcagaaaagggga
ttccacgttcattatgcacttaaggctaatttcaatgatgtgttgctgaaacgcatacag
gagatcggatttggcgctgactgcgtcagcggaaatgaggtaaggaaggcaatagaatgt
ggatttactcctcagaatatcacttttgctggggttggaaagtcagacaaggaaatcaac
tatgcccttacacaacagatttttgccttcaacgtcgaatctatccaagaactcgaagtc
attaacgagctggcatcaaaacaaggtgtaaaagccaatgtagctttgcgtatcaatccc
aatgtggatgcgcacacgcatcattatattacgactggtcttgatgaaaataaatttggg
gtgccaaatgccgatcttgaaaaatgtgcttcggtactaaaaaagtgtgaatttatcgaa
ctggtggggctgcatttccatgtaggatcgcagattaccgatatgactgtgtttaaaagc
ctatgcgtaaaagtcaacgaatggaaaaactggttcgaggagcgtggaacacagatccgt
gtactgaacgtaggtggcggattgggaatcgactataaaaatcctgacagtaattctatt
ccggattttgaagcttatttcgatatctttgaccgtttcctggagagaaaaccatatcag
gaagtccattttgaattaggcagagctctggttgcacaatgtggcagcttgataagccgg
gtactttatgttaaaaatggtgtaaaaaagaatttcctcgttctggatgcggggatgact
gagcttatgcgaccggccctatatcaggcttatcacaagatcgaaaatctcagtgctgtt
gagaccgaggaatccctgaattatgatgtcgtcgggcccatctgtgagtcttcagactgc
tttggtaaagaagtcccgctgccggattctggacgtggtgatcttattgccatccgttcc
gctggagcttatggagaggtaatggcctcccgttataatttgagggaagaaatcagattt
gtctatagcgatcagttataa
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