Sphingobacterium thalpophilum: NCTC11429_03612
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Entry
NCTC11429_03612 CDS
T06778
Symbol
vsr
Name
(GenBank) Very short patch repair protein
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
stha
Sphingobacterium thalpophilum
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stha03400
]
NCTC11429_03612 (vsr)
DNA repair and recombination proteins [BR:
stha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
NCTC11429_03612 (vsr)
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Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
VTR47983
UniProt:
A0A4U9VNR0
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All DBs
Position
1:complement(4195661..4196143)
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AA seq
160 aa
AA seq
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MGNYEEEADKIHVPRFEEAAGFYTSPTRSFNMSKIRSRNSKPELILRKALWAKNIRFRLH
DKSLPGTPDIVIKKYKLAIFVDGEFWHGFDWKNNKERIKSNQLFWIPKIERNMQKDRRVN
KALRDMDYVVFRFWTQDILRNLPKVLNQIELFLETRRLWP
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atggggaactacgaagaggaagcagataaaatacatgtcccacgttttgaggaagctgcc
ggtttctatacgagcccgacacgcagcttcaacatgtccaaaatcagaagtcgcaattca
aagccggaattaatactacgaaaagcattgtgggctaaaaacatacgatttcgtttgcac
gataaatctcttcctggaactccggatattgtcattaaaaaatataaactcgccatattc
gtagatggagaattctggcatggctttgactggaaaaataataaagagcgtatcaaatcc
aatcagcttttctggattccgaagatcgaacgtaatatgcaaaaagacagacgtgtcaac
aaagccctgcgcgatatggattacgtcgttttcagattctggacacaggacattctcaga
aatcttcctaaagtgctcaatcaaattgagttgtttctcgaaactaggaggctctggcca
taa
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