Sphingobacterium thalpophilum: NCTC11429_03695
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Entry
NCTC11429_03695 CDS
T06778
Symbol
oprF_2
Name
(GenBank) Outer membrane porin F precursor
KO
K03286
OmpA-OmpF porin, OOP family
Organism
stha
Sphingobacterium thalpophilum
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stha02000
]
NCTC11429_03695 (oprF_2)
Transporters [BR:
stha02000
]
Other transporters
Pores ion channels [TC:
1
]
NCTC11429_03695 (oprF_2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
OmpA
DUF748
DUF6250
Motif
Other DBs
NCBI-ProteinID:
VTR48427
UniProt:
A0A4U9VQ40
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All DBs
Position
1:4275514..4276770
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AA seq
418 aa
AA seq
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MKRLALLVILLTGGNAMAQGLFNKIKQKAEKIAGNTIENVIEGKIKKQNEQGSQAAATTG
SVEPQETGSVRQQRGLSSTTTYDFVPGSKVLLADDFSQDPLGQFPLKWYTRSKGEVVSLN
NVKGKWLRLYPGTFVSPVVDIGEHATIEFDLIMDWPLAGGYMVPALNFAFYDRGDRGEIL
SYDYRLKNCLKVSIAPYRSEAAVQLTSYENVAKKLETDKYRVANFDKKVGQVIHVAVSIQ
KERVRIWLDKEKVFDLPNAAPVNSNFNQLKLDMASSNYTNDQLGFYVSNFRFAEGSADTR
SKLLTSGRLETSGILFASNSAEITSDSDGTIREVATVLKDNPSMKLRIVGHTDAVGDAEK
NMLLSKKRADAVRDMLVKTYEVAIAQIETEGKGSTVPVVDEISEENRAKNRRVEFVKL
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagattagcactattggtcattttattgacaggaggcaatgcgatggctcaggga
ctttttaataaaatcaaacaaaaagcggagaagatagctgggaataccatcgaaaatgta
atcgagggaaagatcaaaaagcaaaacgaacaaggctcgcaggctgctgcgacaactggc
agtgttgagccgcaggaaaccggatcggtccgtcaacagcgcggactgagcagtacgact
acgtatgactttgtgccggggagcaaggtacttcttgcagatgatttctcacaggatccg
ttgggtcagttccccttaaaatggtacacccgtagtaaaggagaggttgtcagtctcaat
aatgtcaaagggaaatggctgaggttgtatcccggcacttttgtcagcccagtggtcgat
atcggggagcacgctactattgagtttgacctgatcatggactggcctttggcaggcggt
tatatggtgccggccttgaactttgctttttatgaccgcggcgatagaggcgaaattttg
tcttacgactaccgtttaaaaaactgtctcaaagtcagtatcgctccgtaccgttcggaa
gcggcggtacagttgacttcctacgaaaatgtcgccaaaaagctagagacagataaatat
agggtggccaattttgataagaaagtaggccaggtcattcatgttgcggtcagtattcaa
aaagagcgggtccgcatctggctggataaagagaaggtgtttgacctgcccaatgcagca
ccagtgaacagcaacttcaaccagcttaaattagatatggccagttccaattataccaac
gatcagctgggcttctatgtttccaatttcaggtttgccgaaggaagtgccgatacgcgg
tccaagctattgacgagtggtaggttagaaaccagtggtatcctctttgcctccaactcc
gccgaaataacatccgatagtgatggcacgataagagaagtggcaaccgtgctcaaagac
aatccgtcgatgaagctccgcattgtaggccatactgatgctgttggagatgctgaaaaa
aatatgctgctgtcaaagaagcgtgccgatgccgtccgtgatatgctggtcaaaacctat
gaggttgccattgcgcagattgaaaccgaaggtaaaggatccacggtgccggtcgtcgac
gaaatcagtgaggaaaacagagcaaaaaatagaagagtggaattcgtaaagctgtga
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