Sphingobacterium thalpophilum: NCTC11429_04065
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Entry
NCTC11429_04065 CDS
T06778
Symbol
sbcD
Name
(GenBank) Nuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
stha
Sphingobacterium thalpophilum
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stha03400
]
NCTC11429_04065 (sbcD)
DNA repair and recombination proteins [BR:
stha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC11429_04065 (sbcD)
Archaeal homologous recombinant proteins
NCTC11429_04065 (sbcD)
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GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Metallophos_3
Ring_hydroxyl_A
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
VTR50281
UniProt:
A0A4U9W0S0
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Position
1:complement(4670849..4672054)
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AA seq
401 aa
AA seq
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MKILHTADWHLGKRLDSFSRMDEQIAVMEEIIRLADEQDADLIIIAGDLFDAFNPGVEAI
ELFYRTIKRLAKNGMRPVIAIAGNHDSPNLIDAPDPLARASGIILIGHPQAMVAPFTTEG
FSVLRSDKGFIELQINHFDYPIRIIHTAYANEIRLKQYLGEDKEVQLNKALAANWKQLAE
NYCDDQGVNILTAHLYMNKYGMALLEEPDGEKPIKIGNADLIYAESIPPQIQYTALGHIH
GYKNIGTVDKPAVYASSPLCYSFSEAGQTKYVAMINAVPATNVSVERIPLTQGKPLIRKS
FDDIAECVGWLSDNRDALVELTLRSTTFLKAEDRRLIYQTHPGIVYLIPVVQQEETNAPD
TKEIRLTEDISTLFKDYFRSKNANQAPNDDILDLFREILNS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattgcataccgccgactggcatttagggaaacgactggacagcttttcgcgg
atggatgagcagattgcagtgatggaagaaatcattcggctggctgacgagcaggatgcc
gatcttattattatcgccggtgatctttttgacgcattcaacccgggcgttgaggccatt
gaactcttctacaggaccatcaaaaggctggcgaaaaacggcatgcgccccgtcatcgcg
atcgccggcaaccatgactcacctaacctgatcgatgcccccgaccctttggcgcgcgca
tcaggtatcatattgatcggacacccacaagctatggtagctccgtttaccaccgaaggc
ttttccgttctgcgctcggacaagggttttattgagctacagatcaaccactttgactat
cctatccgaatcattcatacagcatatgccaacgaaatccgtctcaagcagtatctgggt
gaagacaaagaagtacagttgaataaagcgctggcagccaactggaagcagttggcagaa
aactattgtgatgaccagggtgtcaatatactgacagctcacctctatatgaataaatac
ggcatggctttactcgaggagcctgatggcgaaaagccgattaaaataggaaacgccgac
ctgatttatgcggagtccatcccaccgcagattcagtatacggccttaggtcatatacac
gggtataaaaacatcggcacggtagacaagcccgctgtttatgcctcgtctccactatgt
tatagcttttcggaagcggggcagaccaaatacgtcgctatgatcaatgccgtaccagcc
accaatgtctcggtcgaacgcatcccattaacacagggaaaaccactgatccggaaatca
tttgacgatattgccgaatgtgtcggctggctatccgacaatcgggatgcgctggtggaa
ctcaccttgagatccactaccttcctgaaagccgaagaccgcaggctgatctatcagacc
catccgggcatcgtttatctgatccctgtggtacaacaggaggaaacaaatgcccccgac
acaaaagaaattcgtctgacagaggatatttcaacgctgtttaaggactacttcagatca
aaaaatgccaatcaggcaccaaacgacgacatcctcgaccttttccgcgaaatactaaat
tcttaa
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