Sphingobacterium thalpophilum: NCTC11429_04085
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Entry
NCTC11429_04085 CDS
T06778
Symbol
gyrA_2
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
stha
Sphingobacterium thalpophilum
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stha03032
]
NCTC11429_04085 (gyrA_2)
03400 DNA repair and recombination proteins [BR:
stha03400
]
NCTC11429_04085 (gyrA_2)
Enzymes [BR:
stha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NCTC11429_04085 (gyrA_2)
DNA replication proteins [BR:
stha03032
]
Prokaryotic type
DNA Topoisomerases
NCTC11429_04085 (gyrA_2)
DNA repair and recombination proteins [BR:
stha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC11429_04085 (gyrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DAO_C
Motif
Other DBs
NCBI-ProteinID:
VTR50366
UniProt:
A0A4U9VSD7
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Position
1:complement(4691739..4694294)
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AA seq
851 aa
AA seq
DB search
MAEETENDNNLVPANDRIIPINIEDQMKSAYIDYSMSVIVSRALPDARDGMKPVHRRVLY
GMLDLGVTSGKPYKKSARIVGDVLGKYHPHGDSSVYDTMVRMAQDWSLRYPLVDGQGNYG
SIDGDPPAAMRYTEARLKKIAEEMLSDINKDTVDFQNNFDDSLQEPTVLPTRIPNLLVNG
ASGIAVGMATNMAPHNLSEVIDGTVAFIDNRDIEVSELMQYIKGPDFPTGALIYGYAGVQ
DAFNTGRGRIVMRAKAEIETSSSGKEQIIVTEIPYQVNKANMIERTAELVNEKKLEGISA
IRDESDRSGMRIVYDIKRDANANVVLNNLFKYTALQTSFSVNNIALVKGRPQLLNLKDMI
HEFVEHRHDVIVRRTRYELAEAEKRAHILEGYLIALDHLDEVIRLIRNSETPEDARVGLM
DKFGLSDLQARAILDMTLRRLTGLERDKIKEEYAELMKTIDYLKSVLEDESLRMKIIKDE
LIEIKEKYGDERRSQIVHSAEDMRMEDFIDDEEIVITISHNSYVKRTPLSEYKRQGRGGR
GSIGTNTREEDFTEHIITASAHNYMLLFTEAGRCFWLRAFEIPEGSRTSRGRALQNIINV
PKEEKIKAYILVKNLKDQEYLENNFIIMCTKKGTIKKTSLEAYSRPRANGINAININEGD
QLIEACLTTGSSEIVMALRSGRAIRFNESTVRPMGRTATGVRGITLASETDEVIGMISVN
DSETTVLVVSEKGYGKRTDIEDYRVTNRGGKGVKTINVTEKTGELVAIKGVTDAEDLMII
NKSGIVIRIAVEELRVMGRATQGVRLINLKDNDEIASITKVDREEESDEEIGNPETTEGF
ASEENTDSNEE
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagaaacagaaaacgacaacaatcttgttccggcaaacgaccggattatccca
attaatatcgaggaccagatgaagtccgcctacattgactattccatgtcggtcattgta
tcccgggcccttcctgacgcgcgtgatggtatgaagcctgttcacagacgtgtgctttat
ggtatgttggacttgggggtaaccagcggcaagccttacaaaaagtctgcccgtatcgtg
ggggatgtattaggtaaatatcacccacatggtgattcttccgtgtacgacacgatggtc
cgtatggcacaagattggagtttacgctaccccttggtagacggtcagggtaactacggt
tccattgacggcgatccacctgcggcaatgcgttataccgaggcaagattaaaaaagatt
gccgaagaaatgctgtccgacatcaacaaagatactgtagacttccaaaataactttgac
gactcactacaggaacctaccgtattaccgactcggatacccaaccttcttgtcaatggc
gcttcgggtattgcggtcggtatggcaacaaatatggctccccataacctttcagaagtt
attgacggcaccgtggcctttatcgacaaccgtgatattgaggtgtccgaactgatgcaa
tatataaaaggtcccgatttccctaccggagcattaatctatggatatgcaggggtgcag
gacgcgttcaacaccggacgtggccgcatcgtcatgcgtgctaaagcagaaatagaaacc
agcagttcaggcaaggagcagatcattgtaaccgaaatcccttatcaggtaaataaggcc
aatatgattgaacgtactgccgaattggttaacgagaaaaagctggaaggaatttccgct
atccgtgacgagtcagaccgttcgggtatgcgcattgtttacgacatcaaacgtgacgcc
aacgccaatgtcgtattaaacaatctctttaaatataccgcactacagacttctttttca
gtcaacaacattgctttagttaaaggccgtccacagcttctgaatctgaaagatatgatt
cacgaatttgtcgagcacagacacgatgttatcgtcagacggacccgttatgaattggcg
gaagctgaaaaacgcgcacatattctggaaggctacctgatcgccctggatcatctagat
gaggtcatcagattaattcgtaattccgaaacaccggaagatgcacgggttggattaatg
gacaaatttggtctatccgatcttcaggcacgcgcaattttggatatgaccctgcggcgc
ctaacaggactggaacgggataagatcaaagaggaatacgctgaattgatgaaaacaatc
gactatctgaaatcggtattggaagatgaatccttgcggatgaaaatcatcaaggacgaa
ttgattgaaatcaaagaaaaatatggcgatgaacgtagatcccagatcgtacattctgcg
gaagatatgcggatggaggattttattgatgacgaagaaattgtgatcacgatctctcac
aatagctatgtgaagcgtacaccattgtcagaatataaacgccagggacgcggcggccgt
ggttccatcggcaccaacacccgcgaagaggacttcaccgaacatatcatcacagcctcg
gcacataactatatgctgttgtttaccgaggcgggacgctgtttttggctacgggctttt
gaaattcctgaaggtagccggacgtcacgtggccgtgcacttcaaaacatcatcaacgtt
ccgaaggaggaaaagatcaaagcctatattctggttaaaaatctgaaagatcaggagtat
ctggaaaacaattttattatcatgtgtaccaagaaaggtaccattaaaaagacctcactg
gaggcgtactcacgtccgcgggctaatggtatcaatgcgatcaatatcaacgagggtgat
caattgatcgaagcctgtctgaccactggaagcagcgaaatcgtgatggcactccgttcg
ggacgggcaatccgtttcaatgaatctaccgttcgtccaatgggtagaacagctacaggg
gtgcgcggtatcacattagcttcggagacagatgaagtaattggcatgattagtgtaaat
gattcagaaacaaccgtattggtggtttccgaaaaaggctatggaaaacgtacagatatc
gaagattatcgggtcaccaaccgtggcggtaaaggtgtaaaaaccatcaatgtaacggag
aagacaggtgaactggtcgctataaaaggcgttacggatgctgaagacctcatgatcatc
aacaaatcaggcatcgttatccgcatagcggtagaggaactgagggtcatgggccgtgcg
acacaaggcgtcagactcatcaatctgaaagataatgatgagattgcttccatcactaaa
gtagaccgtgaagaagaatctgatgaagaaatcggaaatccggaaactacggaaggcttt
gcttctgaagaaaacacagattcaaacgaagaataa
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