Sphingobacterium thalpophilum: NCTC11429_04093
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Entry
NCTC11429_04093 CDS
T06778
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
stha
Sphingobacterium thalpophilum
Pathway
stha00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NCTC11429_04093 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
stha01007
]
NCTC11429_04093 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stha03016
]
NCTC11429_04093 (lysS)
Enzymes [BR:
stha01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
NCTC11429_04093 (lysS)
Amino acid related enzymes [BR:
stha01007
]
Aminoacyl-tRNA synthetase
Class II (A)
NCTC11429_04093 (lysS)
Transfer RNA biogenesis [BR:
stha03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
NCTC11429_04093 (lysS)
Prokaryotic type
Other AARSs
NCTC11429_04093 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF4332
Motif
Other DBs
NCBI-ProteinID:
VTR50400
UniProt:
A0A4U9VSH1
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All DBs
Position
1:complement(4702006..4703724)
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AA seq
572 aa
AA seq
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MSTVLSEQEQLRRQAMQSLLDMGIDPFPANEFVVNAHAADILKNYDRDKLNYKNITLAGR
IMSRRVMGSASFFEIQDATGRIQAYIKRDDICPGENKDLYNVVFKKLLDIGDIVGIRGYV
FTTQTEAIAVHVEELTVLSKSLRPLPVVKSAEGKTFDAFTDPEQRYRMRYVDLIVNPANK
DIFVKRTKLFNAMRQFFNDAGYMEVETPVLQSIPGGAAARPFITHHNALDIPLYLRIANE
LYLKRLIVGGFDGVYEFSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMDFTERLLEHC
ALAVNGTTEATFGEHKIDFKAPYKRISMTDSIKEFTGFDITGKSEEEIRIAAKEMGIDVD
DTMGKGKLIDEIFGAKCEGNYIQPTFITDYPKEMSPLTKKHRDNPALTERFELMVCGKEI
ANAYSELNDPIDQRERFEDQLRLSEKGDDEAMFIDQDFLRALEYGMPPTSGLGIGMDRLI
MFLTNNASIQEVLFFPQMRPEKIVKVADVKDYEEQGIPAVWVPALQKMGFTTIEALKEAN
PNKVFNDLGGMRKKMKLDVAMPSKDDVFAWFN
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgtattatccgaacaggaacaacttagaagacaggcgatgcaatccctgctg
gatatgggaatcgatccttttccagcaaatgaatttgtcgttaatgcacatgcggctgat
atattaaaaaactacgatagagataagctgaattataaaaacattaccctagctgggcgt
atcatgagccgccgtgtcatgggcagtgcttccttttttgaaattcaggatgctacggga
cgtatccaggcgtatatcaaacgtgatgatatatgtccgggagaaaataaagatctgtac
aatgtggtttttaagaaacttttggacataggcgatatcgtcggtatcagaggttatgtc
tttacgacacaaacggaagccattgctgtgcacgtggaggagctcaccgtattatccaaa
tcattgcgacctttaccggtcgttaaatcagcagagggcaaaacctttgatgcttttacc
gatcccgaacagcgctatagaatgcgttacgtcgacttgatcgttaatccagccaacaaa
gatatttttgtaaaacgtaccaagcttttcaacgccatgcgtcagttctttaatgatgca
ggctacatggaggtcgaaactccagtacttcaatccattcctggtggtgcggcggcgcgt
ccgtttattacacaccacaatgcactggacattcctttgtacctccgtattgccaacgag
ctgtatctaaagagactgattgtcggcggttttgacggtgtatacgagttttcgaaaaac
ttccgcaacgaagggatggaccgtacacataatccagagtttacggcgatggaaatctat
gtcgcctacaaggactacaattggatgatggactttaccgaacggctcctggagcactgc
gccctggccgtaaacggtaccactgaagctacctttggcgagcataaaattgatttcaaa
gcaccttataaacggatttccatgacagactccattaaagagtttacgggattcgatatc
accggcaaatccgaagaagaaattcgtatcgcagccaaagaaatgggtatcgatgtcgat
gataccatgggtaaaggtaagctcatcgatgagatctttggggcaaaatgtgaaggaaac
tacatccagccaacattcataacggattacccgaaagaaatgtcaccattgaccaaaaaa
caccgcgataatccagcgctcaccgaacgttttgagctgatggtgtgcggtaaagagatt
gcgaacgcctattcggaactgaacgatccgattgatcagcgtgaacgctttgaggatcag
cttcgtctttctgaaaaaggcgatgacgaagccatgttcattgaccaggattttctacgc
gcattggagtacggcatgccgcctacctccggtcttggaatcggcatggaccgcctgatc
atgtttttgaccaacaatgcatccatacaagaggttttatttttcccgcagatgcgtccc
gagaaaatagtaaaagtggctgacgtgaaggattatgaagaacagggaattccggccgtg
tgggtaccagcattacaaaaaatgggttttacgaccattgaagccctcaaagaagccaat
ccgaacaaagtgttcaacgaccttggtggtatgcgcaaaaaaatgaaattggatgttgcg
atgccgtcaaaagatgatgtgtttgcttggtttaattaa
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