Sphingobacterium thalpophilum: NCTC11429_04187
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Entry
NCTC11429_04187 CDS
T06778
Symbol
citB
Name
(GenBank) Aconitate hydratase
KO
K27802
aconitate hydratase A / 2-methylisocitrate dehydratase [EC:
4.2.1.3
4.2.1.99
]
Organism
stha
Sphingobacterium thalpophilum
Pathway
stha00020
Citrate cycle (TCA cycle)
stha00630
Glyoxylate and dicarboxylate metabolism
stha00640
Propanoate metabolism
stha00720
Other carbon fixation pathways
stha01100
Metabolic pathways
stha01120
Microbial metabolism in diverse environments
stha01200
Carbon metabolism
stha01210
2-Oxocarboxylic acid metabolism
stha01230
Biosynthesis of amino acids
Module
stha_M00009
Citrate cycle (TCA cycle, Krebs cycle)
stha_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
stha_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NCTC11429_04187 (citB)
00630 Glyoxylate and dicarboxylate metabolism
NCTC11429_04187 (citB)
00640 Propanoate metabolism
NCTC11429_04187 (citB)
09102 Energy metabolism
00720 Other carbon fixation pathways
NCTC11429_04187 (citB)
Enzymes [BR:
stha01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
NCTC11429_04187 (citB)
4.2.1.99 2-methylisocitrate dehydratase
NCTC11429_04187 (citB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
VTR50807
UniProt:
A0A4U9VWA1
LinkDB
All DBs
Position
1:complement(4801709..4804477)
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AA seq
922 aa
AA seq
DB search
MSKEKSIRELQINGHVYQYSSIKDLSEGKVDHLPFSIRILLENVLRNHDGFSITDEHIST
LINWSPQPVDKDIPFKPARILMQDFTGVPAVVDMASLRAEFVRHGKDGQKINPAIPVDLV
IDHSVQVDYFGTEYSYDKNVELEYQRNRERYELLKWAQKGLKNFTVVPPGMGICHQVNLE
YLAKGVIERDNWLFPDTLVGTDSHTPMVNGIGVLGWGVGGIEAEAAMLGQPVFFTCPEVI
GLKLTGRIPAMCTATDMVLSITKILRDKGVVGKFVEVFGDGLDSLSVTDRATISNMSPEF
GCTVTYFPIDDRTLEYMHSTNRTAEQIKIVEEYCKRNLLWRTGHEQITYSSVVEFDLSTL
EPTVSGPKRPQDKILVRELKDKFSELLDSEHHRQYVPIPQRSESAWLLEGGSGTEFTFGK
VPVEHASPHEVIAESIHGVRIKHNHKEYVVSDGSIAIAAITSCTNTSNPAVMIGAGLLAR
NAIERGLRTKSWVKTSLAPGSKVVTQYLERSGLSADLDALRFHTVGYGCTSCIGNSGPLP
PQIAEAVEKGELIVASVLSGNRNFEARVHPQVKMNFLMSPMLVVAYALVGRIDVNLLEEP
LDYDPNGQPVYLRDIWPSREEIQKTVADCVKQSDFQEVYNVIFDGSTDWQELKVNLDQNY
QWDPASTYIKESPFFENLQAVPKPIQDIENARVLLYLGDSVTTDHISPAGSFKENTAAGQ
YLKAHQVDKEDFNSYGSRRGNHEVMMRGTFANVRIKNKISDREGGFSRYLPTNEVKTVYD
TAMEYRKTNTPLIVLAGKEYGSGSSRDWAAKGTFLLGVRAVIAESFERIHRSNLVGMGVA
PLVFANGENAERLGLDGTEEYNITGLAEDLTPHKLLQVKATHENGKTTEFQVKARLDSAI
EIEYFKNDGILQYVLRQYLKNN
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaaaaatcgatccgtgaattgcaaattaatggacatgtctatcaatacagt
tccatcaaagatctttctgagggcaaggttgaccacctccccttcagtattcggatacta
ttggaaaatgtgttacgtaatcatgatggcttcagtattactgatgaacatattagcacc
ttaatcaattggtctccgcaacctgttgacaaagatattccattcaaaccggcgcgtatc
ctgatgcaagactttacaggtgtaccagccgttgtagacatggcttcgcttcgtgccgaa
tttgtccgtcatggcaaagacggacagaaaatcaatcctgccatacctgttgacttggtg
attgaccactctgtacaggttgactattttggaacagaatattcttacgataaaaatgtg
gagctcgaatatcagcgtaaccgcgaacgttacgaactgctcaaatgggcgcaaaaagga
ctaaaaaatttcacggtggtacctcccggtatgggcatatgtcatcaggtaaatctggaa
tatctagcgaagggggttattgaacgagacaactggctttttccagacaccctcgtcggt
acagactcccatacaccgatggtcaacggaataggcgttttaggctggggtgtgggcggt
atcgaggctgaggccgctatgcttgggcagcccgttttctttacctgtccagaggtcatc
ggactcaagctcacgggtagaatcccggcgatgtgcactgcgacggatatggtgctgtca
attaccaaaatcctacgcgacaagggtgttgtcggcaaatttgtggaagtgtttggtgat
ggactggacagtttgtctgtaacggatcgggctaccatatccaatatgtcacccgaattc
ggatgtacagtcacctattttcccatagatgaccgcacattggaatatatgcacagtaca
aaccgcaccgcggagcagatcaaaatcgtggaagaatattgtaagcgcaacctcctttgg
cgtacggggcatgagcagatcacctattcgtcggttgtagaatttgacttatccactctg
gaacctacagtttcgggtccaaagcggccacaagataaaattctggtacgcgagctaaaa
gacaagttctcagaactgctggatagcgagcatcataggcaatatgtgcctatccctcaa
cgatcggagtctgcctggcttttggaaggcggttctggcacagaatttaccttcgggaaa
gttccggtcgaacatgcatcaccgcatgaagtcattgccgaatcgatacatggcgtgaga
ataaaacacaatcataaagaatatgtcgtcagtgatggcagcattgcgatcgcggccatc
acgagctgtacgaatacctcgaaccctgctgttatgattggggcgggtctgttggcgaga
aatgctatagagcgtggcttacggacaaaatcttgggttaaaacgtctctggctcctggc
tcaaaggtggttacacagtacttggaaaggtcagggcttagtgcagaccttgatgcgctg
agattccatacggtaggttatggctgtacctcctgtattggaaactcgggaccattgccc
cctcaaattgctgaagctgtggagaagggcgaactgatcgtcgcctcggtactttcaggc
aatcgcaattttgaagcccgtgttcacccacaagtaaaaatgaacttcctgatgtcacca
atgctcgtcgtagcgtatgcgcttgtcggtcgcattgacgtcaacttattggaagaacct
ctcgactacgacccaaatggccagcccgtataccttcgggatatctggcccagccgcgaa
gagattcaaaaaactgtcgccgattgtgttaaacagtcggactttcaggaagtctataat
gtcatttttgacggctctacggattggcaggaacttaaggtcaatttggaccaaaactac
caatgggatccggcctcaacgtatatcaaggaatcgccgttttttgaaaaccttcaagcg
gttccaaaaccaatccaggacatcgagaatgcgagggtattgctttatctcggtgactcg
gtaacgacggaccatatttctcctgccggttcatttaaggagaatactgcagcgggacag
tatcttaaagcccatcaggtagacaaggaagacttcaactcttatggatctagacgtggt
aatcacgaagttatgatgcggggtacttttgctaacgtacgaatcaaaaataaaattagc
gatcgcgagggtggattcagccgttacctaccgaccaacgaagttaaaactgtttacgac
acggcaatggagtatcgtaaaacaaacacaccactgatcgtattagccggcaaagaatac
ggttcggggtcatcacgggactgggctgccaaaggcacattcttgctcggtgtacgtgct
gtaattgccgaaagttttgaacgtatacaccgaagcaatctcgtgggcatgggtgtggcg
ccgcttgtttttgccaacggtgaaaatgcagagagacttgggcttgatggaactgaagaa
tataatattacaggcctcgcagaagatctgacaccacacaagttgttgcaggtaaaagcg
acacacgaaaatggtaagactacggaattccaagttaaagcccggttggattcagcgata
gaaattgagtattttaaaaatgacggaatcctacaatatgtactgcgacaatatttgaaa
aataattaa
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