Sphingobacterium thalpophilum: NCTC11429_04833
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Entry
NCTC11429_04833 CDS
T06778
Symbol
fadB
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
stha
Sphingobacterium thalpophilum
Pathway
stha00071
Fatty acid degradation
stha00280
Valine, leucine and isoleucine degradation
stha00310
Lysine degradation
stha00362
Benzoate degradation
stha00380
Tryptophan metabolism
stha00410
beta-Alanine metabolism
stha00640
Propanoate metabolism
stha00650
Butanoate metabolism
stha00907
Pinene, camphor and geraniol degradation
stha00930
Caprolactam degradation
stha01100
Metabolic pathways
stha01110
Biosynthesis of secondary metabolites
stha01120
Microbial metabolism in diverse environments
stha01200
Carbon metabolism
stha01212
Fatty acid metabolism
Module
stha_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
NCTC11429_04833 (fadB)
00650 Butanoate metabolism
NCTC11429_04833 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
NCTC11429_04833 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
NCTC11429_04833 (fadB)
00310 Lysine degradation
NCTC11429_04833 (fadB)
00380 Tryptophan metabolism
NCTC11429_04833 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
NCTC11429_04833 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
NCTC11429_04833 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NCTC11429_04833 (fadB)
00930 Caprolactam degradation
NCTC11429_04833 (fadB)
Enzymes [BR:
stha01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
NCTC11429_04833 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
NCTC11429_04833 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
NCTC11429_04833 (fadB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
DAO
2-Hacid_dh_C
NAD_binding_2
F420_oxidored
ApbA
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
VTR53473
UniProt:
A0A4U9W442
LinkDB
All DBs
Position
1:5469685..5471808
Genome browser
AA seq
707 aa
AA seq
DB search
MMQKKENPDPSPLFDIQRDSDGIVFIQPLIEIPSARPGIQVTLEHFVVLMTKLLQEQETT
ALVYTSPLNADQGNYTSLFNQVYEGMFDSSNMYHMMLEVIKWKSFNKPIVSILDRSCTGI
RLAPMLWSDYRIAIQGISLGFPESKFGAFTGLGTTVLLPQIIGYTQTLQLLTQGNSIGST
DGHKLALIDHVAADFDGGIATAKRWILSKNRATDPAFRSSSADMENTVAAIQKKTRGLLP
GTNAVIQLLQSAVSRPLDEVLQAEATVYLAVLKTPEVLHMVRTLDHGIHRTQHPDWLECT
SDNTIRQIGILGAGMMGSGIAYEAAKAGLNVILKDVTLLRAQQGKAYSAQICEKLLAQGN
MDSEQQQALLSRITATEHIHDLSGSDLIIEAVFEDAALKAEVTKQSFAYLTKNGVFASNT
TSLPISNLATATPHPERFIGMHFFSPVDRMPLVEIIRGQQTDQNTLQQAVLVALKLGKIP
IVVHDGPAFFTSRIFFNYLLEAITMLLEGIPARQIETEALTAGFAVGPLAVLDEISLELM
LHVYDQLPTLHASQHRAYAYLANMIKNQRKGRKSGHGFYDYDSTTRTKTIWQDPTLSMSI
DSAAPTLIRKRLLHVMALDSYRCLEEGILDQPIDGDIGSVLGVGYPAYTGGVFGHIDLTG
LPLFVQECTSFFHFGEQWELPPSLKTLAGKDFKFYTGFRSNWQKREE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaaaaaagaaaaccccgacccatcgccgctgtttgacatacaacgggacagc
gatggaattgttttcatacagccgctgatcgaaatccccagtgcccgaccgggcatacag
gttacacttgagcacttcgtcgtattaatgactaagctgctccaagaacaagaaaccacc
gcgttggtgtatacctcaccattgaacgccgatcagggaaactatacgtccctgtttaat
caggtttacgaaggcatgttcgactccagcaacatgtaccacatgatgctggaggtaata
aaatggaaatcattcaacaagcctattgtatccatacttgaccgctcctgcacaggcatc
aggctagcgccaatgttatggtctgattatcgaattgctatacaagggatcagcttgggc
tttccagaaagtaaatttggcgcctttaccggcttaggaacaaccgtgctcctgcctcag
atcattggctacactcaaaccttgcagctattaacacagggaaattcaatcgggagtaca
gatggtcacaaattagctttgatcgatcatgtagcagctgattttgatggcggtatagcg
acggcaaaacgctggatattgagcaaaaatagagctaccgatccggcattccgctcctct
tcggcggacatggaaaatacggtggcggcgattcaaaaaaaaacacgggggctgcttccc
ggtaccaatgcggtcatccagttgttgcaatcagcagtatctcgtccgctggacgaagtg
ctgcaggctgaggctacagtatatctagctgttctgaagacacccgaagtgctgcacatg
gtgcgcacccttgatcatggtatacatcgcacacaacatcctgactggctagaatgtacc
tcagataatacgatcagacagataggcattctcggcgctggcatgatgggatcaggtatc
gcctacgaggcagctaaggccggtttaaatgtgattttgaaagatgtcaccctactacgg
gcccagcagggcaaagcgtattcagctcagatttgtgaaaaattgctggcacagggcaat
atggacagcgagcagcaacaggcactgctgtccaggattacggctaccgagcatatccac
gatctttcaggatctgatctcattattgaagccgtatttgaagatgcagcattaaaagca
gaggtgacaaaacaaagttttgcctacctcaccaaaaatggtgtgtttgcctccaataca
acgtctcttcctattagcaacctggccacagcaactcctcatcccgagcgctttatcggc
atgcattttttttcgccggtagatcgcatgcccttagttgagattatccgcggccaacaa
acagatcaaaacacattacaacaggccgtattggtcgcattaaaactgggcaaaattccg
atagtcgtacatgatggccctgcattttttacttcccgcatctttttcaactaccttctg
gaagccatcaccatgttactggaaggcataccggcccggcagatcgagaccgaagcattg
actgccggattcgctgtgggaccgctcgcggtgctggacgaaatttcattggaacttatg
ctgcatgtgtatgatcagttgcccacccttcacgccagtcagcacagagcctatgcttat
ctcgccaatatgatcaaaaatcagcgaaaaggtcgcaaatcgggacacggattctatgac
tacgacagcactacgcgaactaaaacaatttggcaggacccaactttgtccatgtccatt
gatagtgccgcccccacattaatacgaaaaagactacttcatgtcatggctttggatagc
tatcgttgtttagaggagggtatattggatcagcccattgacggcgatatcggttctgtt
cttggtgtaggctatcctgcttacacaggcggcgtatttggtcatatcgatcttaccggt
ttaccgctttttgttcaggagtgcacatcattctttcacttcggtgaacaatgggaactg
cccccatcgttaaagacactggccggcaaggactttaaattttatacaggttttagatcc
aactggcaaaaaagggaagaatag
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