Sphingobacterium thalpophilum: NCTC11429_04864
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Entry
NCTC11429_04864 CDS
T06778
Symbol
phr
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
stha
Sphingobacterium thalpophilum
Brite
KEGG Orthology (KO) [BR:
stha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stha03400
]
NCTC11429_04864 (phr)
Enzymes [BR:
stha01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NCTC11429_04864 (phr)
DNA repair and recombination proteins [BR:
stha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NCTC11429_04864 (phr)
Prokaryotic type
NCTC11429_04864 (phr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
VTR53583
UniProt:
A0A4U9W4E2
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All DBs
Position
1:complement(5510901..5512214)
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AA seq
437 aa
AA seq
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MEKATRVVVFWFRRDLRMEDNKGLSRALATGLPVLPIFIFDTNILERLASKTDRRVDYIH
QALEGINRKLQKYGARLNVFRGDPLTVFGTLATQYDLQEVYCNRDYEPEAIQRDREIFEF
LKASGVPFRGVKDQVIFDRNELVKNDGTAYTIYTPYAKKWREELERHTYQPSSGLVGHFL
QQEHIPLIPLEQLGFKKTDLLFRLPRLDAEIIANYDRYRDFPALSATTNLGMALRFGTIS
IRQCVAFALEKNEVWLSELIWREFFMQIMYHYPHVVKESFRKKYDDIQWRNHEEEFDRWC
EGQTGYPLVDAGMRQLNKTGFMHNRVRMIAASFLCKHLLIDWRWGEAYFAEKLNDYDLAA
NNGNWQWAAGSGCDAAPYFRVFNPILQAEKYDKNRVYISRWIPELVSGRYPGAMVDHAFA
RDRALKAYAAALGKTNT
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagctacgagagttgttgtgttttggttccggagggatcttcgtatggaagac
aataaggggttgtcgcgagccttggccacggggctgcctgtgttgcctatttttattttt
gacaccaatattttggagcggcttgccagtaagaccgaccggcgcgtagattatatccat
caggcactggagggcatcaaccgaaagttacaaaaatacggtgccaggttaaatgtcttc
aggggtgatccgctaaccgtgtttggcaccttagcgacgcaatatgatctgcaggaagtc
tattgtaaccgcgactatgaacccgaggctattcaaagagaccgggaaattttcgagttc
ttgaaagcttccggtgttccgtttagaggcgtaaaagatcaggtcatctttgatagaaac
gagcttgtgaaaaatgacggtacagcctatacgatctatacgccttatgccaaaaaatgg
cgggaagaattagaacggcatacttatcagccgtcatctggcctagtgggtcattttctt
cagcaggagcatatccctttgatacccctagagcagctgggatttaaaaagacggatttg
ctatttcgtcttccgcgtttagatgctgaaattatagcgaactacgacagatatagagac
tttccggcattgtcggcaacgacaaatttgggcatggcactccgcttcggtacgatcagt
atccgtcaatgtgtggcctttgcgttggaaaaaaatgaagtttggctttcagagcttatc
tggcgtgaattttttatgcaaataatgtatcattatccacatgtcgtcaaggagtcgttc
agaaagaaatatgatgatattcaatggcgtaaccatgaggaggaatttgaccgatggtgc
gaaggacagaccggataccccttggttgatgcagggatgcgacagttgaacaagacgggg
tttatgcataaccgcgttcggatgatagcggccagcttcctctgcaaacatctgttgatt
gactggcgctggggcgaagcctattttgccgaaaaattgaacgattatgatttggccgcc
aataacgggaactggcagtgggcggcaggaagcggatgtgatgcggcaccctattttagg
gtttttaatccaatacttcaggcagaaaaatatgataaaaatagggtgtatatctcccgc
tggattcccgagctcgtgtcgggtcgatacccgggggccatggtcgaccacgcatttgca
cgggaccgtgcactaaaagcgtatgctgctgctttgggaaaaaccaatacataa
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