Streptococcus thermophilus ASCC 1275: T303_00270
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Entry
T303_00270 CDS
T03360
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sthe
Streptococcus thermophilus ASCC 1275
Pathway
sthe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sthe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
T303_00270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sthe03021
]
T303_00270
03400 DNA repair and recombination proteins [BR:
sthe03400
]
T303_00270
Enzymes [BR:
sthe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
T303_00270
Transcription machinery [BR:
sthe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
T303_00270
DNA repair and recombination proteins [BR:
sthe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
T303_00270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
Dehydratase_LU
Motif
Other DBs
NCBI-ProteinID:
AIC23527
LinkDB
All DBs
Position
complement(41241..44879)
Genome browser
AA seq
1212 aa
AA seq
DB search
MVDVNRFKSMQITLASPTKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRAKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDM
SPRALEEVIYFAAYVVIDPKETPLEPKSLLTEREYREKLQEYGHGSFVAKMGAEAIQDLL
KQVDLEAEIAELKEELKTATGQKRFKAVRRLDVLDAFYKSGNKPEWMVLNILPVLPPDLR
PMVQLDGGRFAASDLNDLYRRVINRNNRLARLLELGAPGIIVQNEKRMLQEAVDALIDNG
RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPR
LMAIELFKPFVMREIVAREYAGNVKAAKRMVERGDERIWDILEDVIKEHPVLLNRAPTLH
RLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARLLLLAAEHI
LNPKDGKPVVTPSQDMVLGNYYLTMEDEGREGEGMIFKDIDEAVMAYHNGYVHLHSRVGI
AVDSMPDKPWKENQLHKILVTTVGKILFNSIIPSEIPYLQETTNENLTDSTPDKYFLEPG
QDIQTVIDSLEINAPFKKKHLGNIIAEIFKRLRTTETSAFLDRLKDLGYYYSTLAGLTVG
IADIPVIDNKQEIIDAAHHRVEEINKAFRRGLMTEDDRYVAVTTTWREAKDALEKRLIET
QDPKNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFS
THGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLVIRAITDGKEVTETL
EERLFGRYTKKSVKHPETGEVIVGPDTLITEDMAAAIVNAGVEEVTIRSVFTCKTRHGVC
RHCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRIQE
IFEARNPKGEAVITEVKGTVIEIEEDAATRTKKVFVQGKTGMGEYVVPFTARMKVEVGDE
VHRGEALTEGSIQPKRLLEVRDTLSVETYLLAEVQKVYRSQGVEIGDKHVEVMVRQMLRK
VRVMDPGDTDLLPGTLMDISDFTDANKDIVISGGVPATSRPVLLGITKASLETNSFLSAA
SFQETTRVLTDAAIRGKKDHLIGLKENVIIGKIIPAGTGMARYRNIEPLAVNEVEVIENI
AVDEAIVESSED
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
gtggttgacgtaaatcgatttaaaagtatgcaaattacactagcttcaccaactaaggtc
cgttcatggtcttatggtgaggttaagaaacctgaaacaatcaactaccgtacgctcaaa
ccagaacgtgaaggtctgttcgacgaagtgatctttggtcctactaaagactgggaatgt
gcgtgtgggaaatacaaacgtatccgttataaagggatcgtttgtgaccgctgtggtgtt
gaagtaacacgtgctaaggttcgtcgcgaacgtatgggtcacatcgagttgaaagcacca
gtatcacatatctggtacttcaagggaatcccttctcgtatgggattgactttggatatg
agtcctcgtgcacttgaagaagttatttacttcgcagcttacgtggttatcgatccaaag
gaaacaccgcttgagccaaaatctctcttgactgaacgtgaatatcgtgaaaaattgcaa
gagtatggtcatggttcatttgtcgctaaaatgggtgcagaagctatccaagatctcttg
aaacaagtagatttggaagccgaaattgctgaactcaaagaagagttgaagacagcaact
ggtcaaaaacgttttaaagcagttcgtcgtttggacgttcttgatgccttttacaagtct
ggtaataaaccagaatggatggtgcttaacatattgccagtattgccaccagatcttcgt
ccgatggttcaattggacggtggacgttttgcagcatctgacttgaacgacctctaccgt
cgtgttatcaaccgtaataaccgtttggctcgtttgcttgagttgggtgctccaggtatc
atcgtgcaaaacgaaaaacgtatgttgcaagaagcggtagacgctcttattgataatgga
cgtcgtggtcgtccaattactggaccaggtagtcgtccacttaaatctttgagccacatg
cttaaaggtaaacaaggtcgtttccgtcaaaacttgcttggtaaacgtgtcgacttctct
ggccgttccgttattgccgttggtccaacacttaaaatgtatcaatgtggtgtgccccgt
ttgatggccatcgaacttttcaaaccatttgttatgcgtgaaatcgttgcgcgtgaatac
gcaggtaacgtgaaagctgctaaacgtatggttgagcgtggtgatgaacgtatttgggat
attcttgaagatgttatcaaggaacacccagtgcttcttaaccgcgcacctaccctccac
cgtttgggtatccaggcctttgaacccgtcttgattgatggtaaggctcttcgtcttcac
ccattggtatgtgaggcctacaatgccgactttgacggtgaccaaatggccatccacgtt
ccattgtctgaagaagctcaagctgaagcacgtttgctccttcttgcggcagaacacatc
cttaaccctaaagacggtaaaccagtcgtaacaccatctcaggatatggttcttggtaac
tattacttgacaatggaagatgaaggccgtgaaggtgaaggtatgatcttcaaggatatt
gatgaggcagttatggcttatcataatggttatgttcacttgcatagccgtgtaggtatt
gcagtcgatagcatgcctgataaaccttggaaagaaaaccaacttcacaaaatcttagta
acaactgttggtaagattctcttcaactcaatcattccatcagaaattccatatcttcaa
gaaacaacaaatgagaacttgacagatagtacaccagataaatacttccttgaaccgggc
caagatatccaaacagttatcgatagtttggaaattaatgcgccattcaagaagaaacat
cttggtaacatcattgctgaaatcttcaaacgtcttcgtacaactgaaacatcagctttc
cttgaccgtttgaaagaccttggttactactactcaacacttgctggattgacagtgggt
atcgccgatatcccagttattgataacaaacaagaaattatcgatgctgctcaccaccgt
gttgaagaaattaacaaagctttccgtcgtggtttgatgacagaagatgaccgttatgtt
gctgttacaacaacatggcgtgaagcgaaagatgcacttgaaaaacgtctgattgagaca
caagatcctaagaatccaatcgttatgatgatggactcaggagctcgtggtaacatctct
aacttctctcaacttgccggtatgcgtggtttgatggctgcccctaacggacgtatcatg
gaattgcctatcctttcaaacttccgtgaaggtttgagcgttttggaaatgttcttctct
actcacggtgcgcgtaaaggtatgaccgatacagcccttaagactgccgactctggttac
cttactcgtcgtttggttgacgttgcccaagacgttatcattcgtgaagacgattgtgga
actgaccgtggtcttgttattcgtgccattactgatggtaaagaagtaacagaaactctt
gaagaacgtctttttggtcgttacactaagaaatctgttaaacatcctgaaactggcgaa
gttatcgttggtccagatactttgattactgaagatatggctgcagctattgtcaatgct
ggtgttgaagaagtaactatccgttcagtctttacatgtaagactcgtcacggtgtctgt
cgtcactgttacggtatcaacttggcaacaggtgatgcggttgaagttggtgaagcagtt
ggtactatcgctgcccaatctatcggggaaccaggtacacagcttaccatgcgtaccttc
cacaccggtggagtagcctcaaacaccgatatcacacagggtcttccacgtatccaggaa
atctttgaagcacgtaaccctaaaggggaagcggttatcactgaagttaagggtactgtt
atcgaaatcgaagaagatgctgcgacacgtactaagaaagtcttcgttcaaggtaagact
ggaatgggtgaatatgtcgttccatttacagctcgtatgaaagtagaagttggtgacgaa
gtacaccgtggtgaggccttgacagaagggtcaatccaaccgaaacgtctccttgaagta
cgtgataccttgtcagttgaaacttatcttcttgcagaagtgcaaaaagtttaccgtagc
caaggggtagaaatcggtgacaaacacgtcgaagtaatggttcgtcaaatgcttcgtaaa
gtacgtgttatggatccaggtgatacagatctccttccaggtacacttatggatatttct
gacttcacagatgctaacaaggatattgttatctctggtggtgttcctgcaacatctcgt
ccagtccttcttggtattactaaagcctcacttgaaacaaattcattcttatcagcggct
tccttccaagaaacgacacgtgtgcttacagatgcagctatccgtggtaagaaagatcat
cttattggtcttaaagaaaatgttatcattggtaagattatccctgctggtacaggtatg
gctcgctaccgtaacattgaaccacttgcagttaacgaagttgaagttattgaaaacatt
gctgttgatgaagcaattgtggaatcatctgaagactaa
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integrated database retrieval system
