Streptococcus thermophilus ASCC 1275: T303_04270
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Entry
T303_04270 CDS
T03360
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sthe
Streptococcus thermophilus ASCC 1275
Pathway
sthe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sthe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
T303_04270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sthe03400
]
T303_04270
Enzymes [BR:
sthe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
T303_04270
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
T303_04270
DNA repair and recombination proteins [BR:
sthe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
T303_04270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_IS1595
NFACT_N
Zn_ribbon_TFIIB
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AIC24153
LinkDB
All DBs
Position
773739..774560
Genome browser
AA seq
273 aa
AA seq
DB search
MPELPEVETVRRGLEKLLLGRTILSLEVKVPKMIKTSYDSFLHDLPGQTIQAMRRRGKYL
IFDFGQLIIISHLRMEGKYLLFTDQVPDNKHFHLFFKLDDGSTLVYQDVRKFGTFDLLDR
KQEEAYFTRKKLGPEPTKKTFKYVPFERALMHSGKSIKPLLLEQKLVAGLGNIYVDEVLW
AAKVHPETPANKLSKAAMKRVHDQTIAILQLGIAKGGSTIRTYRNALGEDGTMQNYLQVY
GKTGQPCPRCASMIVKIKLGGRGTHLCPHCQKR
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagttacctgaggtagaaacagttagacgaggtttagaaaagctgttactagga
aggactattttgtcacttgaagttaaggtccctaaaatgatcaagacatcatacgatagt
tttttgcatgatttgcctggtcagacgattcaagccatgcgacgtaggggaaagtatctc
atttttgattttggtcagttgataataatttctcacttacgcatggagggaaaatatctg
ctgttcacagaccaggttcctgacaacaaacattttcacctcttttttaagctagatgat
ggctcaaccctagtttatcaggatgtacgtaagtttgggacttttgatttattggatagg
aaacaagaagaggcctattttacaaggaaaaaacttggccctgagcctaccaagaagacc
tttaaatatgtaccgtttgagagagccttaatgcattctggcaagtctattaagccctta
ctcttggagcagaagttagtagccggtctaggaaatatctacgttgatgaggtgctttgg
gcagccaaggttcatcctgagacaccagcaaataaacttagcaaggcagccatgaaacgg
gttcacgatcaaacgattgccattttacagctggggattgctaagggtggttccactata
aggacctatcgtaacgcccttggtgaggatgggaccatgcagaattatctacaggtttat
ggaaagacaggtcaaccttgtccacgttgcgcaagcatgattgtgaaaatcaagttagga
ggaagaggaacacatttgtgtcctcattgtcaaaaacgatga
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