Streptococcus thermophilus ASCC 1275: T303_08270
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Entry
T303_08270 CDS
T03360
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
sthe
Streptococcus thermophilus ASCC 1275
Pathway
sthe02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sthe00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
T303_08270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sthe03021
]
T303_08270
Transcription machinery [BR:
sthe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
T303_08270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DprA_WH
DBD_HTH
DUF2316
Motif
Other DBs
NCBI-ProteinID:
AIC24810
LinkDB
All DBs
Position
complement(1537380..1538489)
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AA seq
369 aa
AA seq
DB search
MATKKQNTAFNVQVADFIRNHKKAGTAIDDEITEKLVIPFVLDADGIDDLLERLTDGGIS
ITDKDGNPSSKYVVEAPKPEELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLSNEEEKEL
AIAVENGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIA
ERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQL
DEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRS
KQLKDFIED
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgaaaaaacaaaatacagcatttaacgttcaagtcgctgatttcattcgtaat
cacaaaaaagctggtacagcaattgatgatgaaatcacagaaaaactagttatcccattt
gttttagatgctgatgggattgatgaccttttggaacgtttgacagatggtggtatctct
attactgataaagatggaaatccttcatctaaatatgttgttgaggcaccaaaaccagaa
gagcttacagacgaggagcttcttggttcaaactcagctaaagtcaatgaccctgttcgt
atgtacctcaaagagattggggtagtgcccctcttgagtaacgaagaggaaaaagaattg
gctatcgctgttgaaaatggtgatttggaagctaaacaacgtttggcagaagccaacctt
cgtttggtagtctcaatcgctaaacgctatgtcggacgtggcatgcagttcttggacttg
attcaagagggtaacatggggcttatgaaagccgttgataaatttgactactcaaaaggt
ttcaagttttcaacttatgcgacatggtggattcgtcaagcaatcactcgtgccatcgca
gaccaagcacgtaccatccgtatcccagttcacatggttgaaactatcaataaattggta
cgtgagcaacgtaacctcttgcaagagttgggacaagacccaacacctgagcaaattgct
gagcgtatggatatgacaccagataaggttcgtgaaatccttaagattgctcaagaacca
gtctcacttgaaacacctatcggtgaagaggatgacagccatttgggtgattttatcgaa
gatgaagttatcgaaaatccagtagattacacaactcgtgtcgttcttcgtgaacaattg
gatgaggtgcttgatacccttacagaccgtgaagaaaatgttctacgtctccgtttcggt
cttgatgatggtaagatgcgtaccttggaagatgttggtaaagtcttcaacgttactcgt
gaacgtattcgtcagatcgaagctaaagcccttcgaaaattacgccatccaagtcgcagc
aaacaacttaaagactttattgaagactaa
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integrated database retrieval system
