Streptococcus thermophilus ASCC 1275: T303_08665
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Entry
T303_08665 CDS
T03360
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sthe
Streptococcus thermophilus ASCC 1275
Pathway
sthe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sthe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
T303_08665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sthe03019
]
T303_08665
03009 Ribosome biogenesis [BR:
sthe03009
]
T303_08665
Enzymes [BR:
sthe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
T303_08665
Messenger RNA biogenesis [BR:
sthe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
T303_08665
Ribosome biogenesis [BR:
sthe03009
]
Prokaryotic type
rRNA helicases
T303_08665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
GRP
Helicase_RecD
AAA_22
DUF6363
Motif
Other DBs
NCBI-ProteinID:
AIC24882
LinkDB
All DBs
Position
complement(1612204..1613787)
Genome browser
AA seq
527 aa
AA seq
DB search
MKFTDLNLSEDIQSAVVAAGFEQPSPIQELTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
DKIRTEENTIQALVIAPTRELAVQSQEELFRFGRDKGVKVRSVYGGSSIEKQIKALRSGA
HIVVGTPGRLLDLIKRKALKLNNIETLILDEADEMLNMGFLEDIEAIISRVPEERQTLLF
SATMPDAIKRIGVQFMKDPEHVKIKAKELTNVNVDQYFIRVKEQEKFDTMTRLMDVDQPE
LSIVFGRTKRRVDELTRGLKLRGSRAEGIHGDLDQNKRLRIIRDFKNGQIDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGQSGQSITFVSPNEMGYLGIIENLTKK
RMKGLKSPTAQEAFQSKKKVALKKIERDFADEAIRANFDKFKDDAVKLAQEFTPEELALY
ILSLTVQDPETMPEVEIAREKPLPFKPSGGGFGGKGGKGGRGRGRDNNRRGGYRGDRNRD
DRDGGRRDFKRKSKNNSRDFENRGNKRPHRASSEKKNGFVIRNKGDK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacagatttaaacctatcagaagacatccaatcagctgttgtagctgccggt
tttgaacaaccatcacctatccaagagttgacaattccacttgctcttgaaggtaaggat
gtcatcggtcaggcacaaactggtactggtaaaacagctgcctttggtttgcctacccta
gataaaattcgtacagaagaaaatacaattcaagccctggttattgccccaacacgtgag
ttggcagtgcaatctcaagaagagcttttccgttttggccgtgataagggcgttaaggtt
cgctcagtatacggtggttctagcatcgagaaacaaatcaaggccctccgttcaggtgcc
cacattgtagtagggacaccaggtcgtctcctagaccttatcaaacgtaaagcccttaaa
cttaacaatatcgagactttgattttggatgaagctgatgaaatgcttaacatgggcttc
ctagaagacattgaagcaattatcagtcgagtaccagaggaacgtcaaacccttctcttc
tcagcaactatgcctgatgccatcaaacgtattggtgttcagttcatgaaagatcctgag
catgtgaaaatcaaggctaaggaattgaccaatgttaacgttgatcaatactttatccga
gtgaaggaacaagagaagtttgatactatgactcgtcttatggatgttgaccaacctgaa
ttgtcaatcgtctttggacgtaccaaacgtcgtgtggacgagttgacacgtggtttgaaa
cttcgtggttcccgtgcagaaggtatccacggagaccttgaccaaaacaaacgtcttcgt
attatccgtgacttcaagaacggccaaatcgatatcttggttgcaacagacgttgcggcg
cgtggtcttgacatttcaggtgttactcacgtctacaactacgatattccacaagaccca
gaaagctacgttcaccgtattggacgtacaggccgtgcaggccaatcaggtcaatcgatt
acgttcgtttctccaaacgaaatgggttacttgggcatcatcgaaaatttgactaagaaa
cgcatgaaaggccttaagtcaccaacagctcaagaagccttccaatctaagaagaaagtt
gcccttaagaaaattgaacgtgactttgcggatgaagctatccgtgctaactttgacaag
tttaaggacgatgctgttaaattggctcaagaattcacacctgaagaattggcgctttat
atcttgagcttgaccgttcaagatccagagacaatgccagaagtagaaattgcgcgtgaa
aaaccattgccatttaaaccatcaggtggtggctttggtggtaaaggtggcaaaggtggc
cgtggccgtggtcgcgataacaaccgccgtggtggataccgtggcgaccgtaaccgtgat
gatcgagacggtggccgtcgagacttcaaacgcaagtctaagaataacagtcgtgacttc
gaaaatcgtggcaacaaacgcccacaccgtgcttcaagcgaaaagaaaaatggctttgtt
atccgtaacaagggtgataagtaa
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