Caldimonas thermodepolymerans: IS481_00455
Help
Entry
IS481_00455 CDS
T06911
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
sthm
Caldimonas thermodepolymerans
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sthm03400
]
IS481_00455
DNA repair and recombination proteins [BR:
sthm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
IS481_00455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
QPC31693
LinkDB
All DBs
Position
complement(92827..93144)
Genome browser
AA seq
105 aa
AA seq
DB search
MSETPEQRNRTMRAVRSRDTAPEMIVRRFLHAAGLRFRLHDRHLPGVPDLVFPSRRIALF
VHGCFWHQHPGCKAADRPKSWPDYWNRKLDGNMVRDARHWLYAVL
NT seq
318 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagacgccggagcagcgcaaccgcactatgcgggctgtgcgttcccgcgacacc
gccccggaaatgatcgtgcggcgctttctccacgccgctggcctgcgcttccggctccat
gatcggcaccttcctggcgttcctgatctggtgtttccaagccgccgcatagcgctgttc
gtgcatgggtgtttctggcatcagcacccaggctgcaaggcggccgaccggccgaagtcg
tggccagactactggaatcggaagctggatggaaacatggtgcgtgacgcccgccactgg
ctctatgccgttttgtga
DBGET
integrated database retrieval system
