Caldimonas thermodepolymerans: IS481_00705
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Entry
IS481_00705 CDS
T06911
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm00550
Peptidoglycan biosynthesis
sthm01100
Metabolic pathways
sthm01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IS481_00705 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
IS481_00705 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sthm01011
]
IS481_00705 (mrdA)
Enzymes [BR:
sthm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
IS481_00705 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
sthm01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
IS481_00705 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QPC31741
LinkDB
All DBs
Position
137189..139231
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AA seq
680 aa
AA seq
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MTELKNVELELSRFRARVLFAAAMVLVCFGLIFARLAYLQVIRYDELSTRAENNRIAVVP
IVPNRGLIVDRNGVVLANNYSAYTLELTPSKIADLDATIDALSEVVEITNYDRRRFRRLM
DESKSFESLPIRTRLTDEEVARFSVQAYRFPGVEIKARLFRHYPLGEIGSHVIGYIGRIN
QAEKEKIEDSEDAANYRGTDYIGKLGIEQSYERELHGITGFEEVETSAGGRAVRRLRSSP
AIPGNTVVLSIDIKLQALVERLYGNRRGALVAIDPKTGELLAFVSKPTFDPNLFVEGIDV
ENWRALNESPDKPLLNRALRGTYPPGSTFKPFMAMAALNSGKRGPNEAILDTGVFLFGNH
RFRSHGDVGLGMVDMHRSIVKSSNVYYYSLANEMGVDLIHAQLAPFGFGQITGIDIEGEV
RGVLPSTEWKRRAYKKPEQQRWYAGETISLGIGQGYNNFTMLQLSHALATLVSGGERHVP
HLVREIRDVVTRERRPVGGQRLEPLDLKAQHVEIIKRAMHAVTQEGTSTRVFAGAPYASG
GKTGTAQAVTIRQNEKYNAAKMAEYLRDHSLYIAFAPVDDPQIAVALIVENAGFGAQAAA
PIARRVLDYWLAGIYPSEEDILAVQNGQAAAPIGTPRRASEVQLPAPVLPATGSTVLPVP
AQAVPASAVAPVSLNPEPAR
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaactcaagaacgtcgaactcgagctgtcgcgctttcgcgcgagggtgctgttc
gccgcggccatggtgctggtgtgcttcgggctgatcttcgcgcgcctggcctacctgcag
gtgatccgctacgacgagctgtccacgcgcgccgagaacaaccgcatcgccgtggtgccc
atcgtccccaaccgcgggctgatcgtcgaccgcaacggcgtggtgctggccaacaactac
tcggcctacacgctggagctgacgccgtcgaagatcgccgacctggacgccaccatcgac
gccctgtccgaggtggtcgagatcaccaactacgaccggcggcgcttccgccggctgatg
gacgagtccaagagcttcgagtcgctgccgatccgcacccgcctgaccgacgaggaggtg
gcgcgcttctcggtgcaagcctaccgctttcccggcgtggagatcaaggcacggctgttc
cgccactacccgctcggcgagatcggcagccacgtgatcggctacatcggccgcatcaac
caggccgagaaggagaagatcgaggactccgaggacgcggccaactaccgcggcaccgac
tacatcggcaagctgggcatcgagcagagctacgagcgcgagctgcacggcatcaccggc
ttcgaggaggtggagaccagcgccggcgggcgcgcggtgcggcggctgcgctccagcccg
gcgatcccgggcaacaccgtggtgctgtccatcgacatcaagctgcaggcgctggtcgag
cggctgtacggcaaccggcgcggcgcgctggtggcgatcgaccccaagaccggcgagctg
ctggccttcgtcagcaagccgaccttcgaccccaacctgttcgtcgagggcatcgacgtc
gagaactggcgcgcgctcaacgagtcgcccgacaagccgctgctcaaccgcgcgctgcgg
ggcacctacccgcccggctccacgttcaagccgttcatggcgatggccgcgctcaacagc
ggcaagcgcgggccgaacgaggccatcctcgacaccggggtgttcctgttcggcaaccac
cgcttccgcagccacggcgacgtcgggctgggcatggtcgacatgcaccgctcgatcgtc
aagtcgagcaacgtctactactactcgctggccaacgagatgggcgtggacctgatccac
gcgcagctcgcgccgttcggcttcggccagatcaccggcatcgacatcgagggcgaggtg
cgcggcgtgctgccgtccaccgaatggaagcgccgtgcctacaagaagcccgagcagcag
cgctggtacgccggcgagaccatctcgctgggcatcggccagggctacaacaacttcacg
atgctgcagctgtcgcatgcgctggccacgctggtctcgggcggcgagcgccacgtgccg
cacctggtgcgcgagatccgcgacgtggtcacgcgcgagcgtcgcccggtgggcggccag
cgcctcgagccgctcgacctgaaggcgcagcatgtcgagatcatcaagcgcgcgatgcac
gcggtgacgcaggaaggcacctcgacccgcgtgttcgccggtgcgccctacgcgagcggc
ggcaagaccggcaccgcgcaggccgtcacgatccgccagaacgagaagtacaacgcggcc
aagatggccgagtacctgcgcgaccactcgctgtacatcgccttcgccccggtcgatgat
ccgcagatcgcggtcgcgctgatcgtcgagaacgccggcttcggcgcgcaggccgccgcg
ccgatcgcgcgccgggtgctggactactggctggccggcatctatcccagcgaggaagac
atcctggccgtgcagaacggccaggcggccgccccgatcggcacgccgcggcgcgcctcc
gaggtgcagctgcccgcgccggtgctgccggccaccggcagcaccgtgctgcccgtcccg
gcccaggccgtgccggcctccgcggtggcccccgtgtccctcaaccccgagcccgcccga
tga
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