Caldimonas thermodepolymerans: IS481_00880
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Entry
IS481_00880 CDS
T06911
Name
(GenBank) TonB-dependent receptor
KO
K16090
catecholate siderophore receptor
Organism
sthm
Caldimonas thermodepolymerans
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sthm02000
]
IS481_00880
Transporters [BR:
sthm02000
]
Other transporters
Pores ion channels [TC:
1
]
IS481_00880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
MtrB_PioB
Motif
Other DBs
NCBI-ProteinID:
QPC31774
LinkDB
All DBs
Position
178441..180666
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AA seq
741 aa
AA seq
DB search
MARKKTKARSARPVVPSAPRVALAPLGALAAGFSLAGAALAQQAPAEEPRQAGELPVITV
KGQSETEAKETYRATRSGIGKGNQALRDIPQSMTVHTERLMDDRNLDDFRDVLRTTSGVT
FQAGETGEEDVRLRGFSLFQAGDIYVDGIRDAALQERDTFNMDRIEVLKGSASMLFGRGS
TGGVVNQVTKQPFLMDQHEVEATVGSGKEYRLTGDFNLKTGDEAALRINAMYHDADKWGA
REHKKGIAPTYRFGIGTQNEFSIGLYHMEFDNRPLYNHPWVLDNGKLKETLPAKNFYGLA
NDHNRGKATYGTLSHIFRFEEGGELKTTLRHGHYERDLLASVIRGGGQNLTLDDYRNPDQ
VLTRTRKGRIGETDVTYLGSVYSRDGIEWLGLTHNVIAGVEWLHEDAKRNNNTFTGQQLT
LPTTTVGTPNDGATYPNTGSREMNEFDARTISVFGQDLVELTPTVKLLAGLRYDHFKYDY
KAVTGNSPGDFGRTDALWSHRIGLLYQPNDWSSYHVSYGTSFNTSGDTYALSAANEHIKP
EESRNFEVGGKFDLFDNRLFVGASLFYTEKHRERNTDPDTAEVLLSGKRHAAGLDVDIAG
RITPQWEAFFSYTWIPEARIDKNANGKAQPGQTGAQVEGDRPGLTPKHMASLWTTYRVMP
QLRLGAGLNYRGKQNPEGARHVTADAFTTLDLMAEYTINENLSLKFNVNNATDELYADTL
YRGFYAPGAPRTYQLSLKATF
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcaagaaaaccaaggcgcgcagcgcgcgtccggtcgttccgtctgcgccccgc
gtggcactggccccgctgggcgcgctggctgccggcttcagcctggccggcgccgcgctg
gcccagcaggccccggccgaggagccccgccaggccggcgaactgccggtgatcacggtc
aaggggcagtccgagaccgaggccaaggaaacctaccgtgccacccgcagcggcatcggc
aagggcaaccaggcgctgcgcgacatcccgcagtcgatgacggtgcacaccgagcgcctg
atggacgaccgcaacctggacgacttccgcgacgtgctgcgcaccacctcgggcgtgacc
ttccaggccggcgagaccggcgaggaggacgtgcgcctgcgcggcttctcgctgttccag
gccggtgacatctacgtggacggcatccgcgacgccgcgctgcaggagcgcgacaccttc
aacatggaccgcatcgaggtgctgaagggctcggcctccatgctgttcggacgcggctcc
accggcggcgtcgtcaaccaggtgacgaagcagccgttcctgatggaccagcacgaggtc
gaggcgaccgtcggctcgggcaaggagtaccgcctcaccggcgacttcaacctgaagacc
ggcgacgaggccgcgctgcgcatcaacgcgatgtaccacgacgccgacaagtggggcgcg
cgcgagcacaagaagggcatcgcgccgacctaccgcttcggcatcggcacccagaacgag
ttctcgatcggcctgtaccacatggagttcgacaaccggccgctctacaaccacccctgg
gtgctggacaacggcaagctgaaggaaacgctgccggccaagaacttctacggcctggcc
aacgaccacaaccgcggcaaggccacctacggcacgctgagccacatcttccgcttcgag
gaaggcggcgagctcaagaccacgctgcgccacggccactacgagcgcgacctgctggcc
agcgtgatccgtggcggcgggcagaacctgacgctggacgactaccgcaatcccgaccag
gtgctcacccgcacccgcaagggccgcatcggcgagaccgacgtgacctacctgggttcg
gtctacagccgcgacggcatcgagtggctgggcctcacgcacaacgtgatcgccggcgtc
gagtggctgcacgaggatgccaagcgcaacaacaacaccttcacgggccagcagctcacg
ctgccgacgaccaccgtgggcacgccgaacgacggggcgacttacccgaacactggctcc
agggagatgaacgagttcgatgcccgcacgatcagcgtcttcggccaggacctcgtcgag
ctgaccccgaccgtcaagctgctggccggcctgcgctacgaccacttcaagtacgactac
aaggccgtgaccggcaactcgccgggcgacttcggccgcaccgatgcgctgtggagccac
cgcatcggcctgctgtaccagccgaacgactggtcgtcgtaccacgtctcgtacggcacc
tcgttcaacacctcgggcgacacctacgccctgagcgccgcgaacgagcacatcaagccg
gaggaaagccgcaacttcgaggtcggcggcaagttcgacctgttcgacaaccgcctgttc
gtcggcgcgtcgctcttctacacggagaagcaccgcgagcgcaacaccgacccggacacc
gccgaggtgctgctgtcgggcaagcgtcacgccgcgggcctcgacgtggacatcgccggc
cgcatcacgccgcagtgggaagcgttcttctcgtacacctggatcccggaagccaggatc
gacaagaacgccaacggcaaggcccagcccggccagaccggcgcgcaggtcgagggtgac
cgcccgggcctgacgcccaagcacatggccagcctgtggacgacctaccgcgtcatgccg
cagctgcgcctgggcgcgggcctgaactaccgcggcaagcagaaccccgaaggggctcgc
cacgtgaccgccgacgcgttcacgacgctggacctgatggccgagtacacgatcaacgag
aacctgtcgctgaagttcaacgtcaacaacgcgaccgacgagctgtacgccgacacgctg
taccgcggcttctacgccccgggtgcgccgcgcacctaccagctctcgctcaaggccacg
ttctga
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