Caldimonas thermodepolymerans: IS481_01300
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Entry
IS481_01300 CDS
T06911
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm00521
Streptomycin biosynthesis
sthm00523
Polyketide sugar unit biosynthesis
sthm00525
Acarbose and validamycin biosynthesis
sthm00541
Biosynthesis of various nucleotide sugars
sthm01055
Biosynthesis of vancomycin group antibiotics
sthm01100
Metabolic pathways
sthm01110
Biosynthesis of secondary metabolites
sthm01250
Biosynthesis of nucleotide sugars
Module
sthm_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
IS481_01300 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
IS481_01300 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
IS481_01300 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
IS481_01300 (rfbB)
00525 Acarbose and validamycin biosynthesis
IS481_01300 (rfbB)
Enzymes [BR:
sthm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
IS481_01300 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
KR
Motif
Other DBs
NCBI-ProteinID:
QPC31853
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All DBs
Position
complement(262451..263515)
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AA seq
354 aa
AA seq
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MIFVTGGAGFIGSNFVLHWLAEHGEPVVNLDALTYASGPHNLAAIRDDRRHVFVHGDILD
RALVDRLLAQHRPRAIVHFAAESHVDRSIHGPEAFLRTNVEGTFTLLEATRAWWQRLPDT
ERRAFRFLHVSTDEVYGSLEPDAAPFTEASPCRPNSPYAASKAASDHLVRAWHHTYGLPV
LTVHCSNNYGPFQYPEKLIPLVLVNALAGEPLPVYGDGRHVRDWLYVEDHCRALCAVLAS
GQPGATYNVGGGNELGNLELVQRLCALLDELRPDAAGPHARLIRFVADRPGHDRRYAVDA
GKLRRELGWQPRETLDTGLRKTVQWYLDHPDWITRAKDEAWQAWIARHYAPGTA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcgtgaccgggggcgccggcttcatcggcagcaacttcgtgctgcactggctg
gccgagcatggcgagcccgtcgtcaacctcgacgcgctcacctacgccagcggcccgcac
aacctcgcggcgatccgcgacgaccggcgccacgtcttcgtccacggcgacatcctcgac
cgcgccctcgtcgaccggctgctggcgcagcaccgcccgcgcgccatcgtgcacttcgcg
gccgaaagccacgtcgaccgctccatccacgggcccgaggccttcctgcgcaccaatgtg
gaaggcaccttcacgctgctcgaagccacgcgcgcctggtggcagcggctgccggacacg
gagcggcgcgccttccgcttcctgcacgtctcgaccgacgaggtgtacggatcgctggag
cccgacgccgcgccgttcaccgaggcgtcgccctgccgccccaacagcccctacgccgcc
agcaaggcggcgagcgaccacctggtgcgcgcctggcaccacacctacgggctgccggtg
ctgaccgtgcattgctcgaacaactacgggccgttccagtaccccgagaagctgatcccg
ctggtgctggtcaacgcgctggccggcgaaccgctgccggtctacggcgacggccgccat
gtgcgcgactggctgtacgtcgaggaccattgccgcgcgctgtgcgccgtgctggcatcc
gggcagccgggcgccacctacaacgtcggcggcggcaacgagctcggcaacctcgagctg
gtacagcggctctgtgcgctgctcgacgagctgcggcccgatgcggccggcccgcatgcg
cggctgatccgcttcgtggccgaccgcccgggccacgaccggcgctatgcggtcgatgca
ggcaagctgcgccgcgagctcggctggcagccccgggaaacgctggacaccggcctgcgc
aagaccgtgcagtggtacctggaccatccggactggatcacccgggccaaggacgaggcc
tggcaggcctggattgcgcgccactacgccccggggacggcatga
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