KEGG   Caldimonas thermodepolymerans: IS481_01820
Entry
IS481_01820       CDS       T06911                                 
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
  KO
K02405  RNA polymerase sigma factor FliA
Organism
sthm  Caldimonas thermodepolymerans
Pathway
sthm02020  Two-component system
sthm02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:sthm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    IS481_01820 (fliA)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    IS481_01820 (fliA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sthm03021]
    IS481_01820 (fliA)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:sthm02035]
    IS481_01820 (fliA)
Transcription machinery [BR:sthm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     IS481_01820 (fliA)
Bacterial motility proteins [BR:sthm02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    IS481_01820 (fliA)
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 HTH_38 HTH_23 UPF0122 HTH_50 PhyR_sigma-like Phage_terminase
Other DBs
NCBI-ProteinID: QPC31948
LinkDB
Position
complement(367038..367763)
AA seq 241 aa
MTDDATLTTRRQDLDRLLRQHRPMVRRMAQRLVSRLPANVEFDDLLQAGMIGLAEVLSRS
ELTEGPQFEAYATPRIHGAMLDELRAADWASRDVRRRQRDAGAAVQRLEQRLGRAPQPSE
IARELEITLDEYETLRTSVHESQFVSLDEVTGDDDEGSTLERHVADAQADPVHHVGERRR
RQALVRAIEALPERERQALSLYHEQDLSLREIGEVLGVSESRVCHLHAQAVRRLRIKLRD
W
NT seq 726 nt   +upstreamnt  +downstreamnt
atgacggacgacgccaccctcaccacccgacgccaggacctggaccggctgctgcgccag
caccggccgatggtgcgccggatggcgcagcggctggtgtcccggctgccggccaacgtg
gagttcgacgacctgctgcaggccggcatgatcggcctggccgaggtgctgtcgcgcagc
gagctcaccgaaggtccgcagttcgaggcctacgccacgccgcgcatccacggcgcgatg
ctggacgagctgcgcgcggccgactgggccagccgcgacgtgcgccgccgccagcgcgac
gccggcgccgcggtgcagcgcctggagcagcgcctgggccgcgcgccgcagccttccgag
atcgcgcgcgagctggagatcacgctggacgagtacgagaccctgcgcaccagcgtgcac
gaatcgcagttcgtctcgctcgacgaggtgacgggtgacgacgacgagggaagcacgctg
gagcggcacgtcgccgatgcgcaggccgaccccgtgcaccacgtgggcgaacggcggcgc
cgccaggccctggtgcgcgcgatcgaggcgctgcccgagcgcgagcgccaggcgctcagc
ctctaccacgagcaggacctgagcctgcgcgagatcggcgaggtgctgggcgtgagcgag
tcccgcgtctgccacctgcatgcgcaggcagtgcgccggctgcgcatcaagctgcgggac
tggtga

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