Caldimonas thermodepolymerans: IS481_02745
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Entry
IS481_02745 CDS
T06911
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K18954
AraC family transcriptional regulator, transcriptional activator of pobA
Organism
sthm
Caldimonas thermodepolymerans
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sthm03000
]
IS481_02745
Transcription factors [BR:
sthm03000
]
Prokaryotic type
Helix-turn-helix
AraC family
IS481_02745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
HTH_Tnp_1
RWP-RK
HTH_Tnp_ISL3
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
QPC32116
LinkDB
All DBs
Position
complement(554033..554929)
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AA seq
298 aa
AA seq
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MSHRVPTYALYGEHQQPLMPEALHVESIADRSRLYNWEISPHRHDLFAQLLCLRSGHGEV
LFADARVPFEAPCVITVPPLEEHGFRFSRDMDGLVITVVAHRLQCLLQAAPELVERLSVP
HCLRFSPGSAEFAEIDRACTLLAREMRGAAPWRMNLVEASLVTALVLAARAAAAPARTTQ
GPSPRSLQHAQRFRALLDQRFREQRSIDDYARELGITPTQLNRVCREVLGTSALGALHAR
LMLEAKRDLAYTRLSVKEVALTLGFSDAAYFTRFFTRHAGMSPSEFRDAVRRELGQEG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcaccgcgtcccgacctacgccctgtacggcgagcaccagcagccgctgatgccc
gaggcgctgcacgtcgaatcgatcgccgaccgcagccgcctctacaactgggagatctcg
ccgcaccggcacgacctgttcgcgcagctgctgtgcctgcgcagcggccacggcgaggtg
ctgttcgccgatgcgcgcgtgccgttcgaggcgccgtgcgtgatcaccgtgccgccgctg
gaggaacacggcttccgcttcagccgcgacatggacggcctggtcatcaccgtggtcgcc
caccgcctgcagtgcctgctgcaggccgcgcccgagctggtcgagcgcctgtccgtcccg
cactgcctgcgcttctcgcccggctcggccgagttcgccgagatcgaccgtgcctgcacg
ctgctggcgcgcgagatgcgcggcgccgcgccgtggcgcatgaacctggtcgaggcctcg
ctggtgaccgcgctggtgctggccgcgcgcgccgccgcggccccggcgcgcaccacgcag
ggcccgtcgccgcgcagcctgcagcatgcgcagcgctttcgtgcgctgctggaccagcgc
tttcgcgagcagcgcagcatcgacgactacgcccgcgagctgggcatcacgccgacgcag
ctcaaccgcgtctgccgcgaggtgctgggcacctcggcgctgggggcgctgcatgcgcgc
ctgatgctggaggccaagcgcgacctcgcctacacgcggctgagcgtcaaggaagtggcg
ctgacgctgggcttttcggacgcggcctacttcacccgcttcttcacccgccacgccggc
atgtcgcccagcgagttccgcgacgcggtgcgccgcgagctgggccaggaaggctga
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