Caldimonas thermodepolymerans: IS481_02810
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Entry
IS481_02810 CDS
T06911
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm00061
Fatty acid biosynthesis
sthm00071
Fatty acid degradation
sthm01100
Metabolic pathways
sthm01212
Fatty acid metabolism
sthm02024
Quorum sensing
sthm04146
Peroxisome
Module
sthm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
IS481_02810
00071 Fatty acid degradation
IS481_02810
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
IS481_02810
09145 Cellular community - prokaryotes
02024 Quorum sensing
IS481_02810
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sthm01004
]
IS481_02810
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sthm04147
]
IS481_02810
Enzymes [BR:
sthm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
IS481_02810
Lipid biosynthesis proteins [BR:
sthm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
IS481_02810
Exosome [BR:
sthm04147
]
Exosomal proteins
Exosomal proteins of breast milk
IS481_02810
Exosomal proteins of breast cancer cells
IS481_02810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QPC32127
LinkDB
All DBs
Position
566433..568268
Genome browser
AA seq
611 aa
AA seq
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MNGSQGHVERAQTIAQLFWQLAGARGDAVMMRQKELGIWQSYSWNAVRETVSDIAAGLIE
LGLQPGEVISILSNTRREWLWADLGGLAAGAVVSGVYPTDSASQLEYLCDDSRSVYLFVE
DEEQLDKYLTVRERLPGMRRVIVFDMKGLEDFEDPQVMSLDRLCELGRARRQRHPDEVAQ
RLQSRGREDLAILVYTSGTTGRPKGAMLSNANLLAAIGALDRFLPRLHDAERVSFLPMCH
VSERIIGTYYAMLGGARMNFVERPETVFENIQEIQPHLFGGVPRIWEKLYSRVTTAVSEA
APFQQWAYRKAIAWGMAAARHRERGEPVPWPVRARAWLAHVLVLDNVRRMMGLHRTRVAI
TGAAPISPDLLRWYLALGIELDELWGMSELAGAAACNPPGRARIGSVGVPMPDMELRISP
EGELQVRGPQVFMGYLNLPDKTAETFDDGWLRTGDVGRCDPDGYFYITDRMKDIIITAGG
KNITPSEWENQLKFSPYVTDAVVIGDKRPYLTCLVMIDQENVERWAQERNIPFSDFRSLT
RNPEVIRLIGEEIEKVNQEFARVEQIKQFRLIEQRLTAEDEEMTPTMKLKRKLVSQKYAE
LIESMYAAKAA
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaacggatcgcagggacacgtcgagcgggcgcagaccatcgcccagctgttctggcag
ctggccggggcacgcggcgacgccgtgatgatgcggcagaaggaactcggcatctggcag
tcgtacagctggaacgcggtgcgcgagacggtgagcgacatcgccgccggcctgatcgag
ctcggcctgcagccgggcgaggtgatctccatcctctcgaacacgcggcgcgagtggctg
tgggccgacctgggcgggctggccgcgggcgccgtggtcagcggcgtctacccgaccgac
tcggcctcgcagctggagtacctgtgcgacgactcgcgcagcgtctacctgttcgtcgaa
gacgaggagcagctggacaagtacctcacggtgcgcgagcgcctgcccggcatgcgccgc
gtcatcgtgttcgacatgaagggcctggaggacttcgaggacccgcaggtgatgagcctg
gaccggctgtgcgagctgggccgcgcgcgccgccagcgccacccggacgaggtggcgcag
cgcctgcagtcgcgcggccgcgaggacctggcgatcctggtctacacctccggcaccacc
ggccgcccgaagggtgcgatgctctcgaatgccaacctgctggcggcgatcggcgcgctg
gaccgcttcctgccgcgcctgcacgacgcggagcgggtcagcttcctgccgatgtgccac
gtctcggagcgcatcatcggcacctactatgcgatgctgggcggcgcgcgcatgaacttc
gtcgagcggccggagacggtgttcgagaacatccaggagatccagccgcacctgttcggc
ggcgtgccgcgcatctgggagaagctctactcgcgcgtcaccaccgcagtcagcgaggcg
gcgccgttccagcagtgggcctaccgcaaggcgattgcctggggcatggcggcggcgcgc
caccgcgagcgcggcgagccggtgccctggccggtgcgcgcgcgcgcctggctggcgcac
gtgctggtgctcgacaacgtgcgccgcatgatggggctgcaccgcacccgcgtggcgatc
accggggccgcgccgatctcgcccgacctgctgcgctggtacctggcgctgggcatcgag
ctggacgagctgtggggcatgtccgaactggcgggtgcggcggcctgcaacccgccgggg
cgtgcgcgcatcggcagcgtcggcgtcccgatgccggacatggagctgcgcatctccccc
gagggcgagctgcaggtgcgcgggccgcaggtgttcatgggctacctcaacctgccggac
aagaccgccgagaccttcgacgacggctggctcaggaccggcgacgtgggccgctgcgac
ccggacggctacttctacatcaccgaccggatgaaggacatcatcatcacggccgggggc
aagaacatcacgccgtcggagtgggagaaccagctcaagttcagcccctacgtcaccgac
gccgtggtcatcggcgacaagcggccctacctgacctgcttggtgatgatcgaccaggag
aacgtcgagcgctgggcgcaggaacgcaacatcccgtttagcgacttccgctcgctgacg
cgcaaccccgaggtgatccgcctgatcggcgaggagatcgagaaggtcaaccaggaattc
gcgcgcgtcgagcagatcaagcagttccggctgatcgagcagcgcctgaccgccgaggac
gaggagatgacgccgacgatgaagctcaagcgcaagctggtcagccagaagtacgccgag
ctgatcgagtccatgtatgccgccaaggcggcctga
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