Caldimonas thermodepolymerans: IS481_03195
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Entry
IS481_03195 CDS
T06911
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm02010
ABC transporters
sthm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IS481_03195
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IS481_03195
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sthm02000
]
IS481_03195
Transporters [BR:
sthm02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
IS481_03195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Glyco_transf_4
Peripla_BP_4
CoA_binding_2
ApbA
Asp_Glu_race
UvrC_RNaseH_dom
Motif
Other DBs
NCBI-ProteinID:
QPC32200
LinkDB
All DBs
Position
658932..660161
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AA seq
409 aa
AA seq
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MMNLPIPSVARHAFAAAALAAGLCGAAQAQPHQYTISVSLDYTGPFANVMDSWWGGQQSV
FDWWNDTRGKQLGVKLNVKTHDMRYDPSMVARTWPQVLSQDKPIVFLGMGTPDLISLMKR
LPNDKVPMIMGTAMLGPLWTPDGWHFSYRPTYSHEFAGLFAHLQSKLGENRPLRIGTVST
QGLAGWVDQVNGVVALAKTYPDRFQVVSSQWVDPQPISVTNQVREMAKEKPDVILVGTNT
AQVVATAKALKELGLKIPIVTSSHNGLNEAAKAIAPADLEGSYSVFAFAPYNDPSVKVAE
IFAKYNKTKGTWGITSAQTAGQALLALAAIERAVAKVGADKLSGQAVYDALLAGPFEADQ
FLGLLPPVALTREAPFPTERLAVKAMTMKNGQLEAVSTDWMPVPALAKW
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
gtgatgaacctgcctatcccgagcgtggcccgccacgccttcgctgccgccgcgctggcg
gccggcctgtgcggtgcggcgcaggcgcagccacaccagtacacgatctcggtgtcgctg
gactacaccggcccgttcgccaacgtgatggacagctggtggggcggccagcagtcggtg
ttcgactggtggaacgacacccgcggcaagcagctcggggtcaagctcaacgtcaagacc
cacgacatgcgctatgaccccagcatggtcgcgcgcacctggccgcaggtactgtcgcag
gacaagcccatcgtcttcctcggcatgggcacgccggacctgatcagcctgatgaagcgc
ctgcccaacgacaaggtgccgatgatcatgggcaccgcgatgctgggcccgctgtggacg
cccgacggctggcacttctcgtaccggccgacctactcgcacgagttcgcgggcctgttc
gcccacctgcaatcgaagctgggcgagaaccggccgctgcgcatcggcaccgtcagcacc
cagggcctggccggctgggtcgaccaggtcaacggcgtcgtggccctggccaagacctat
ccggaccgattccaggtcgtcagctcccagtgggtggatccgcagccgatctcggtgacc
aaccaggtgcgcgagatggccaaggaaaagcccgacgtgatcctggtcggcaccaacacc
gcacaggtggtcgcgaccgccaaggcgctcaaggagctgggcctgaagatccccatcgtc
acctcgtcgcacaacggcctcaacgaggcggccaaggccatcgcgccggccgacctggag
ggcagctattcggtgttcgccttcgcgccgtacaacgacccgagcgtgaaggtggccgag
atcttcgcgaagtacaacaagaccaagggcacctggggcatcacctcggcccagaccgcc
ggccaggcactgctggcgctggccgcgatcgagcgagcggtcgccaaggtgggcgcggac
aagctcagcggccaggccgtctatgacgcgctgctggccgggcccttcgaggcggaccag
ttcctcggcctgctgccgccggtggcgctgacccgcgaggcgccgttcccgaccgagcgc
ctggcggtcaaggccatgacgatgaagaacggccagctcgaggccgtgtcgaccgactgg
atgccggtgccggcgctggcgaagtggtga
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