Caldimonas thermodepolymerans: IS481_03855
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Entry
IS481_03855 CDS
T06911
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IS481_03855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sthm03019
]
IS481_03855
Messenger RNA biogenesis [BR:
sthm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
IS481_03855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
QPC32318
LinkDB
All DBs
Position
complement(789267..789860)
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AA seq
197 aa
AA seq
DB search
MLDREGFRPNVGIILLNQKNQVFWGKRIRTHSWQFPQGGIKHGETPEQAMFRELHEEIGL
KPEHVRIIARTKDWLRYEVPEHYIRRDARGHYKGQKQIWFLLQLTGRDSDMNLRATDHPE
FDAWRWNDYWVPLDVVIEFKRDVYQMALTELARFLPRVNHHNRYLRGGARPHQREASREE
RHRPAPVQPDDDPADPE
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacagggaaggcttccggcccaacgtcggcatcatcctgctcaaccagaagaat
caggttttctggggcaagcgcatccgcacgcactcctggcagttcccccaagggggcatc
aaacacggagagactcccgagcaggcgatgttccgtgaactgcacgaagaaatcggcctg
aagcccgagcatgtgcgcatcatcgcccgaaccaaggactggttgcgctacgaggtgccc
gaacactacatccggcgcgacgcccgcggccactacaaggggcagaagcagatctggttc
ctgctgcagctgaccggccgggactccgacatgaacctgcgcgccaccgaccacccggag
ttcgacgcctggcgctggaacgactactgggtgccgctggacgtggtcatcgagttcaag
cgcgacgtctaccagatggcgctgaccgagctcgcgcgcttcctgccgcgggtcaaccac
cacaaccgctacctgcgcggcggcgcccgcccgcaccagcgtgaggcctcccgcgaggag
cgccaccgccccgcaccggtgcagcccgacgacgaccctgccgaccccgagtaa
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