Caldimonas thermodepolymerans: IS481_03905
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Entry
IS481_03905 CDS
T06911
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
sthm
Caldimonas thermodepolymerans
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sthm03016
]
IS481_03905 (miaB)
Enzymes [BR:
sthm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
IS481_03905 (miaB)
Transfer RNA biogenesis [BR:
sthm03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
IS481_03905 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
QPC32328
LinkDB
All DBs
Position
complement(797907..799256)
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AA seq
449 aa
AA seq
DB search
MSKKVYIKTFGCQMNEYDSDKMADVLAAAQGYEPTQDPEEADLILFNTCSVREKAQEKVF
SDLGRFKHLKKKGVKIGVGGCVASQEGAAIIERAPYVDVVFGPQTLHRLPEMLAKREQQG
RPQVDISFPEIEKFDHLPPAKVEGASAFVSIMEGCSKYCSYCVVPYTRGEEVSRPFEDVL
VEVAGLADQGVKEVTLLGQNVNAYRGKMGDTDEIADFALLIEYIAEIPGIERIRYTTSHP
NEFTQRLIDVYAKVPQLVNHLHLPVQHGSDRILAAMKRGYTALEYKSTIRKLRAVRPDIS
LSSDFIVGFPGETEEDFAKLMKLVEDVGYDSSFSFIFSPRPGTPAAALHDDTPKEVKLRR
LQQLQAALEANVRRISESRVGTVQRILVEGPSKKDPGELMGRTECNRIVNFPGGPNAQRL
VGQMIDVRITQALPHSLRGEVVVKEQVAA
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaaggtctacatcaagacgttcggctgccagatgaacgagtacgactcggac
aagatggccgacgtgctcgccgccgcgcagggctacgagccgacgcaggacccggaggaa
gccgacctgatcctgttcaacacctgctcggtgcgcgagaaggcgcaggagaaggtgttc
agcgacctcggccgcttcaagcacctaaagaagaagggcgtgaagatcggcgtcggcggc
tgcgtggccagccaggaaggtgcggccatcatcgagcgcgcgccctacgtggacgtggtg
ttcggtccccagaccctgcaccgcctgcccgagatgctggccaagcgggaacagcagggc
cgcccgcaggtggacatctccttccccgagatcgagaagttcgaccacctgccgccggcc
aaggtcgagggcgcctcggccttcgtctcgatcatggaaggctgctccaagtactgcagc
tactgcgtcgtgccctacacccgtggcgaggaggtctcgcgccccttcgaggacgtgctg
gtggaggtcgccggcctggccgaccagggcgtcaaggaagtgacgctgctggggcagaac
gtcaacgcctaccgcgggaagatgggcgacaccgacgagatcgccgacttcgcgctgctg
atcgagtacatcgccgagatccccggcatcgagcgcatccgctacaccaccagccacccg
aacgagttcacgcagcgcctgatcgacgtctacgccaaggtgccgcagctggtgaaccac
ctgcacctgccggtgcagcatggcagcgaccgcatcctcgccgcgatgaagcgcggctac
accgcgctcgagtacaagagcacgatccgcaagctgcgcgccgtgcgcccggacatcagc
ctgtcgagcgacttcatcgtcggcttccccggcgagaccgaggaggacttcgccaagctg
atgaagctggtcgaggacgtcggctacgacagctccttcagcttcatcttcagcccgcgc
cccggcacgccggccgcggcgctgcacgacgacacgcccaaggaggtcaagctgcgccgc
ctgcaacagctgcaggccgcgctggaggccaacgtgcgccgcatcagcgaaagccgcgtg
ggcaccgtgcagcgcatcctggtcgagggcccgtcgaagaaggacccgggcgagctgatg
ggccgcaccgagtgcaaccgcatcgtcaacttccccggcggcccgaacgcgcagcgcctg
gtcggccagatgatcgacgtgcgcatcacccaggccctgccgcactcgctgcgcggcgag
gtggtggtcaaggagcaggtcgcggcctga
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