Caldimonas thermodepolymerans: IS481_04355
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Entry
IS481_04355 CDS
T06911
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IS481_04355 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sthm03019
]
IS481_04355 (groL)
03110 Chaperones and folding catalysts [BR:
sthm03110
]
IS481_04355 (groL)
03029 Mitochondrial biogenesis [BR:
sthm03029
]
IS481_04355 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sthm04147
]
IS481_04355 (groL)
Enzymes [BR:
sthm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
IS481_04355 (groL)
Messenger RNA biogenesis [BR:
sthm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
IS481_04355 (groL)
Chaperones and folding catalysts [BR:
sthm03110
]
Heat shock proteins
HSP60 / Chaperonin
IS481_04355 (groL)
Mitochondrial biogenesis [BR:
sthm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
IS481_04355 (groL)
Exosome [BR:
sthm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
IS481_04355 (groL)
Exosomal proteins of other body fluids (saliva and urine)
IS481_04355 (groL)
Exosomal proteins of breast cancer cells
IS481_04355 (groL)
Exosomal proteins of colorectal cancer cells
IS481_04355 (groL)
Exosomal proteins of bladder cancer cells
IS481_04355 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QPC32410
LinkDB
All DBs
Position
complement(884789..886423)
Genome browser
AA seq
544 aa
AA seq
DB search
MAAKDVVFGGDARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQAIVREGMKYVAAGMNPMDLKRGI
DKAVAALVDELKKISKPTTTSKEIAQVGAISANSDSSIGQIIADAMDKVGKEGVITVEDG
KSLQNELEVVEGMQFDRGYLSPYFINNPDKQAAILENPFVLLYDKKISNIRDLLPTLEQV
AKAGRPLLIIAEDVEGEALATLVVNTIRGILKVCAVKAPGFGDRRKAMLEDIAILTGGKV
ISEEVGLTLEKVQLADLGQAKRVEVAKENTTIIDGAGAAADIEARVKQIRVQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALL
RARQAVGELKGENVDQDAGIKLVLKAIEAPLREIVANAGGEPSVVINKVLEGKGNFGFNA
ANDTYGDMIEMGILDPTKVTRTALQNAASVASLMLTTECMVAEAPKDETPAPGAGGMGGM
GMDM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgtggtcttcggcggtgacgcccgtgcccgcatggtcgagggtgtc
aacatcctggccaacgccgtcaaggtgaccctgggcccgaagggccgcaacgtggtcctg
gagcgctcgttcggcgccccgaccgtgaccaaggacggcgtgtcggtcgccaaggaaatc
gagctgaaggacaagctccagaacatgggcgcccagatggtcaaggaagtcgcttccaag
accagcgacaacgccggtgacggcaccaccaccgccaccgtgctggcccaggccatcgtg
cgcgagggcatgaagtacgtggccgccggcatgaacccgatggacctgaagcgcggcatc
gacaaggccgtcgccgccctggtggacgagctgaagaagatcagcaagccgaccaccacc
tccaaggaaatcgcccaggtcggcgcgatctccgccaactccgactcctcgatcggccag
atcattgccgacgcgatggacaaggtcggcaaggaaggcgtgatcacggtcgaggacggc
aagtcgctgcagaacgaactcgaagtcgtcgagggcatgcagttcgaccgcggctacctg
tcgccgtacttcatcaacaatcccgacaagcaggccgcgatcctcgagaacccgttcgtc
ctgctgtacgacaagaagatcagcaacatccgtgacctgctgccgaccctggagcaggtc
gccaaggccggccgtccgctgctgatcatcgccgaggacgtcgaaggcgaagcgctggcc
accctggtggtcaacaccatccgcggcatcctgaaggtctgcgccgtcaaggccccgggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctgaccggcggcaaggtg
atttcggaagaagtcggcctgacgctcgagaaggtgcagctggctgacctgggtcaggcc
aagcgcgtcgaagtggccaaggaaaacaccaccatcatcgacggcgctggtgctgcggcc
gacatcgaagcccgcgtcaagcagatccgcgtccagatcgaggaagccacctccgactac
gaccgcgagaagctgcaggagcgcgtggccaagctggccggcggcgtggcggtgatcaag
gtcggtgccgccaccgaagtcgagatgaaggagaagaaggcccgcgtggaagacgcgctg
cacgccacccgcgctgccgttgaagaaggcatcgtgcccggcggtggcgtggccctgctg
cgtgcccgccaggccgtcggcgagctgaagggcgagaacgtggaccaggacgccggcatc
aagctggtgctgaaggccatcgaagccccgctgcgcgagatcgtcgccaacgccggtggc
gagccctcggtcgtgatcaacaaggtgctggaaggcaagggcaacttcggcttcaacgcc
gccaacgacacctacggcgacatgatcgagatgggcatcctggatccgaccaaggtgacc
cgtaccgcgctgcagaacgccgcctcggtcgcctcgctgatgctgaccaccgagtgcatg
gtcgccgaagcgccgaaggacgagaccccggcccccggtgcgggcggcatgggcggcatg
ggcatggacatgtaa
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