Caldimonas thermodepolymerans: IS481_04505
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Entry
IS481_04505 CDS
T06911
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IS481_04505 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sthm01007
]
IS481_04505 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sthm03016
]
IS481_04505 (lysS)
Enzymes [BR:
sthm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
IS481_04505 (lysS)
Amino acid related enzymes [BR:
sthm01007
]
Aminoacyl-tRNA synthetase
Class II (A)
IS481_04505 (lysS)
Transfer RNA biogenesis [BR:
sthm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
IS481_04505 (lysS)
Prokaryotic type
Other AARSs
IS481_04505 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QPC32438
LinkDB
All DBs
Position
complement(918416..919942)
Genome browser
AA seq
508 aa
AA seq
DB search
MTERATPAAPAEPQAAPDTNQLIAERREKLAALRQQGVAFPNDFKPRHHAEELHRLYDGR
SNEELEPLHINVSVAGRMMLKRVMGKASFCTLQDGTGRIQLYITRDQVGDEAYAAFKHWD
LGDILGAEGVLFKTKSGELSVQVTVLRLLTKSLRPLPDKFHGMTDQEQKYRQRYVDLITD
EGARKRFVARSKALASIRNYMTQHGFLEVETPMLHPIPGGANAKPFKTYHNALDQEMFLR
IAPELYLKRLLVGGFERVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYHDLMDFTESI
LRQAARDATGSATLTYQGKVVDLEQPFARLSIRDALLRYAPRSDDAQIDDPAYLREQLRI
LGKEAPAHWELPQLQFACFEELVEDKLWEPTFIVDHPVEVSPLARASDTNPAITERFELY
ITGREIANGFSELNDPEDQAARFQAQVAAKDAGDEEAMYFDADYIRALEYGMPPAGGCGI
GIDRLIMLLTDSPNIRDVILFPALRKEQ
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacgtgcgacgcctgccgcccccgccgagccgcaagcagctcccgacaccaac
cagctcatcgccgaacgccgcgagaagctcgccgcgttgcgccagcagggcgtcgccttc
ccgaacgacttcaagccgcgccaccacgccgaggaactgcatcgcctgtacgacgggcgc
tccaacgaggagctcgagccgctgcacatcaacgtctcggtggccggccgcatgatgctc
aagcgcgtgatgggcaaggccagcttctgcacgctgcaggacggcaccggccgcatccag
ctctacatcacgcgcgaccaggtcggcgacgaggcctacgccgccttcaagcactgggac
ctgggcgacatcctgggcgccgagggcgtgctgttcaagaccaagagcggcgagctgtcg
gtgcaggtcaccgtgctgcggctgctgaccaagagcctgcgtccgctgccggacaagttc
cacggcatgaccgaccaggaacagaagtaccgccagcgctacgtcgacctgatcaccgac
gagggcgcgcgcaagcgcttcgtcgcgcgcagcaaggcgctcgcctcgatccgcaactac
atgacccagcatggcttcctggaagtcgagacgccgatgctgcacccgatcccgggcggt
gccaacgccaagccgttcaagacctaccacaacgcgctggaccaggagatgttcctgcgc
atcgcgccggagctgtacctgaagcggctgctggtgggcggcttcgagcgggtgttcgag
atcaaccgcaacttccgcaacgagggcatctcggtacgccacaaccccgaattcacgatg
atggagttctacgcggcgtactggaactaccacgacctgatggacttcaccgagtccatc
ctgcgccaggccgcgcgcgacgcgaccggctcggccaccctcacctaccagggcaaggtg
gtcgacctggagcagccgttcgcccgcctgagcatccgcgacgcgctgctgcgctacgcg
ccgcgcagcgacgacgcccagatcgacgacccggcctacctgcgcgagcagctgcgcatc
ctcggcaaggaggcgccggcgcactgggagctgccgcagctgcagttcgcctgcttcgag
gagctggtcgaggacaagctgtgggagccgaccttcatcgtcgaccacccggtggaggtc
tcgccgctggcgcgcgcctccgacaccaacccggccatcaccgagcgcttcgagctctac
atcaccggccgcgagatcgccaacggcttctcggagctgaacgaccccgaagaccaggcg
gcacgcttccaggcccaggtcgcggccaaggacgccggcgacgaggaggcgatgtacttc
gacgccgactacatccgcgcgctcgagtacggcatgccgccggccggcggctgcggcatc
ggcatcgaccggctgatcatgctgctgaccgattcgccgaacatccgcgacgtgatcctg
tttcccgcgctgcgcaaggagcaatga
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