Caldimonas thermodepolymerans: IS481_05745
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Entry
IS481_05745 CDS
T06911
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm03420
Nucleotide excision repair
sthm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IS481_05745
03430 Mismatch repair
IS481_05745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sthm03400
]
IS481_05745
Enzymes [BR:
sthm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IS481_05745
DNA repair and recombination proteins [BR:
sthm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IS481_05745
MMR (mismatch excision repair)
Other MMR factors
IS481_05745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QPC32660
LinkDB
All DBs
Position
1198227..1200566
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AA seq
779 aa
AA seq
DB search
MTPHTPDPVDASASGNPLLRHLNPEQLAAVTLPARHALILAGAGSGKTRVLTTRIAWLVQ
TGQVSPAGVMAVTFTNKAAKEMLTRLGTMLPIPVRGMWIGTFHGLCNRFLRAHWKLAGLP
QSFQILDAQDQVSAVRRVIKAMNLDEERYVPKQVAWFIAGSKEEGLRPRDVSVRDEQTRK
LVEIYQAYEDQCQREGVVDFAELLLRTYELMRDNAALREHYQHRFRHILVDEFQDTNRLQ
YAWLKLFAGPGNSVFAVGDDDQSIYAFRGAQVGNMSDFEREFHVEHVIKLERNYRSYGNI
LDAANELISHNRRRLGKNLRTEAGPGEPVRVYEATSDFAEAQWVLEEAQQLHREGTPRSE
IAILYRSNAQSRVLESTLFNAGIPYRVYGGLRFFERAEIKHALAYLRLLENPNDDTSYLR
VVNFPTRGIGARTLEQLQDAARTSGRSLYQSVGAVAGKGGANLAAFNALVDAMREATRGL
TLREIIEHVLEASGLQDYYRNEKEGRERLENLDELVNAAEAFVTQEGFGKDAVALPIDEQ
AGAIADGDPPAVALADIVPDAETGEIISPLAAFLTHAALEAGDNQAQAGQDAIQLMTVHA
AKGLEFDCVFITGLEEGLFPHENALSDFDGLEEERRLMYVAITRARKRLYLSHSQTRMLH
GQTRYNIRSRFFDELPEHALKWITPKVQGFGGGRGAQSGWGSAPATPPWSAAPAKIEPRV
ATSDGVALRVGQSVFHNKFGEGMIVTLEGSGNDARAQINFGRHGLKWLALSVAKLTPIE
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgactccgcacacgcccgatccggtcgacgcctcggcgtccggcaatcccctgctgcgc
cacctcaaccccgaacagctcgccgcggtcacgctgcccgcgcgccatgccctcatcctg
gccggcgccggctcgggcaagacccgcgtgctgaccacccgcatcgcctggctggtgcag
accggccaggtgtcgccggccggcgtgatggccgtcaccttcacgaacaaggcggccaag
gagatgctcacgcgcctgggcaccatgctgcccatcccggtgcgcggcatgtggatcggc
accttccacggcttgtgcaaccgcttcctgcgcgcgcactggaagctggccggcctgccg
cagagcttccagatcctcgacgcgcaggaccaggtctcggcagtgcgccgcgtcatcaag
gcgatgaacctggacgaggagcgctacgtgcccaagcaggtggcctggttcatcgccggc
agcaaggaggaggggctgcgccccagggacgtgagcgtgcgcgacgaacagacgcgcaag
ctggtggagatctaccaggcctacgaggaccagtgccagcgcgagggcgtggtcgacttc
gccgagctgctgctgcgcacctacgagctgatgcgcgacaacgccgcgctgcgcgagcac
taccagcaccgcttccgccacatcctggtcgacgagttccaggacaccaaccgcttgcag
tacgcctggctgaagctgttcgccggcccgggcaacagtgtgttcgcggtaggcgacgac
gaccagagcatctacgcgtttcgcggcgcgcaggtcggcaacatgtccgacttcgagcgc
gagttccacgtcgagcacgtcatcaagctggagcgcaactaccgcagctacggcaacatc
ctcgacgcggccaacgagctgatctcgcacaaccgccgtcgcctgggcaagaacctgcgc
accgaggccggcccgggcgagccggtgcgggtctacgaggccaccagcgacttcgccgag
gcgcaatgggtgctggaggaggcgcagcagctgcaccgcgagggcacgccgcgcagcgag
atcgcgatcctgtaccgatccaacgcccagtcgcgcgtgctcgagagcacgctgttcaac
gccgggatcccgtaccgcgtctacggcggcctgcgcttcttcgagcgcgccgagatcaag
cacgcgctggcctacctgcgcctgctggagaacccgaacgacgacaccagctacctgcgc
gtggtcaacttcccgacgcgcggcatcggcgcgcgcacgctcgagcagctgcaggacgcc
gcgcgcaccagcggccgcagcctctaccagagcgtgggtgcggtcgccggcaagggcggc
gcgaacctggcggccttcaacgcgctggtggatgcgatgcgcgaggccacccgcgggctg
acgctgcgcgagatcatcgagcacgtgctggaagcctcggggctgcaggactactaccgc
aacgagaaggaaggccgagagcggctcgagaacctggacgaactggtcaacgccgccgag
gccttcgtgacccaggagggcttcggcaaggacgcggtggccctgcccatcgacgaacag
gccggcgccattgccgacggcgacccgccggccgtggcgctggcggacatcgtgcccgac
gccgagaccggcgagatcatctcgccgctggccgcgttcctgacgcacgccgcgctggag
gccggcgacaaccaggcacaggccgggcaggacgcgatccagctgatgacggtgcacgcg
gccaagggcctggagttcgactgcgtgttcatcaccggcctcgaggaaggcctgttcccg
cacgagaacgcgctgtcggacttcgacgggctggaggaggagcggcgcctgatgtacgtg
gcgatcacccgcgcgcgcaagcggctctacctcagccacagccagacccggatgctgcac
gggcagacccgctacaacatccgcagccgcttcttcgacgagctgcccgagcacgcgctg
aagtggatcacgcccaaggtgcagggcttcggcggcgggcgcggcgcgcagtccggctgg
ggcagcgcgccggcgacaccgccatggagcgcggcgccggcgaagatcgagcccagggtg
gccacgtccgacggcgtggcgctgcgcgtgggccagtcggtgttccacaacaagttcggc
gaggggatgatcgtcaccctcgaaggcagcggcaacgatgcgcgcgcgcagatcaacttc
ggccgccacggcctgaagtggctggcgctgagcgtggccaagctcacgccgatcgagtga
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