Caldimonas thermodepolymerans: IS481_06190
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Entry
IS481_06190 CDS
T06911
Symbol
rsgA
Name
(GenBank) ribosome small subunit-dependent GTPase A
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm00730
Thiamine metabolism
sthm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
IS481_06190 (rsgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sthm03009
]
IS481_06190 (rsgA)
Enzymes [BR:
sthm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
IS481_06190 (rsgA)
Ribosome biogenesis [BR:
sthm03009
]
Prokaryotic type
GTPases
IS481_06190 (rsgA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
AAA_29
ABC_tran
MMR_HSR1
GTP_EFTU
AAA_16
RsgA_N
AAA_30
AAA_22
P-loop_TraG
nSTAND1
AAA_25
Septin
RNA_helicase
WRKY
AAA
AAA_19
Arf
AAA_7
Rad17
AAA_23
DUF5906
Motif
Other DBs
NCBI-ProteinID:
QPC32741
LinkDB
All DBs
Position
complement(1288368..1289285)
Genome browser
AA seq
305 aa
AA seq
DB search
MTRAVELERGLVVAGYGRHYLVETPEGRRVVCRPRGKKSECVVGDRVQWMRTVASGTDEG
VIERIEPRRNLLFRQDEWRTKSFAANLDLLLVMVAVEPQFSESQLSRSLIAAESAGIPVC
ILLNKVDLPQAAAARERLAPYRAMGYDVQEVSLQAAPDEARAALAPRLDGRATLVLGPSG
TGKSTLINLMVPAAQAQVGEISQALNSGRHTTTSTQWYWVDAARTTGLIDSPGFQEFGLR
QIDPQQLPAYMPDLRAHVGECRFYNCTHRQEPGCGVRAAVERGEVSASRYRIYGEIHEEL
SRPAY
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgacccgagctgtcgagctggaacgcgggctggtggtggccggctacggccgccactac
ctggtcgagacgcccgaaggccggcgcgtggtctgccgcccccgcggcaagaagagcgaa
tgcgtggtcggtgaccgggtgcagtggatgcgcacggtcgccagcggcaccgacgaaggc
gtgatcgaacggatcgagccgcgccgcaacctgctgttccggcaggacgagtggcgcacc
aagtccttcgccgccaacctggacctgctgctggtgatggtcgccgtcgagccgcagttc
agcgagtcgcagctgagccgctcgctgatcgcggccgagtccgccggcatcccggtgtgc
atcctgctcaacaaggtcgacctgccgcaggccgcggcggcccgcgagcgcctggcgccc
taccgggcgatgggttacgacgtgcaggaggtgtcgctgcaggcggcgccggacgaggcg
cgcgccgcgctcgcgccgcgcctggacggccgcgcgacgctggtgctgggcccctcgggc
acgggcaagagcacgctgatcaacctgatggtgcccgccgcgcaggcccaggtgggcgag
atctcgcaggcgctcaactccggccgccacacgacgaccagcacgcagtggtactgggtc
gatgcggcgcgcaccacggggctgatcgattcgcccggcttccaggaattcggcctgcgc
cagatcgacccgcagcagctgccggcctacatgcccgacctgcgcgcgcatgtcggcgag
tgccgcttctacaactgcacccaccggcaggagccgggctgcggggtgcgcgcggcggtc
gagcgcggcgaggtcagcgcgagccgctaccgcatctacggcgagatccacgaggagctg
tcgcgcccggcctactga
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