Caldimonas thermodepolymerans: IS481_06205
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Entry
IS481_06205 CDS
T06911
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
IS481_06205 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sthm03019
]
IS481_06205 (orn)
03009 Ribosome biogenesis [BR:
sthm03009
]
IS481_06205 (orn)
Messenger RNA biogenesis [BR:
sthm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IS481_06205 (orn)
Ribosome biogenesis [BR:
sthm03009
]
Eukaryotic type
Pre-60S particles
RNases
IS481_06205 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
pP_pnuc_1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QPC32744
LinkDB
All DBs
Position
1290968..1291546
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AA seq
192 aa
AA seq
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MTPDPATIPPALPFNDQNLIWIDLEMTGLYPDRDRIIEIAVVVTDAQLTTRVEGPVFAIH
QSDEVLDAMDAWNKGTHGRSGLIDRVKASTITEAQAEEQTIEFLRRFVPKNTSPMCGNSI
CQDRRFLANYMPRLESFFHYRNLDVSTLKELAKRWKPEVAASFKKAQKHTALADIHESID
ELVHYREHFLQR
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgaccccagaccccgccaccattccacctgccttgccgttcaacgaccagaacctgatc
tggatcgacctggagatgaccgggctgtaccccgaccgcgaccgcatcatcgagatcgcc
gtcgtggtgaccgacgcgcagctgaccacgcgcgtcgaaggcccggtgttcgcgatccac
cagagcgacgaggtgctcgacgcgatggacgcctggaacaagggcacgcacggccgctcg
ggcctgatcgaccgcgtcaaggcctcgaccatcaccgaggcgcaggccgaggagcagacc
atcgagttcctgcgccgcttcgtgccgaagaacacctcgccgatgtgcggcaactcgatc
tgccaggaccggcgtttcctcgccaactacatgccgcggctggaaagcttcttccactac
cgcaacctggacgtcagcacgctcaaggaactggccaagcgctggaagcccgaggtcgcc
gcgtcgttcaagaaggcccagaaacacactgccctggccgacatccacgaatccatcgat
gagctcgtccactaccgggagcacttcctgcaacgctga
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