Caldimonas thermodepolymerans: IS481_06275
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Entry
IS481_06275 CDS
T06911
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
sthm
Caldimonas thermodepolymerans
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sthm03032
]
IS481_06275
03036 Chromosome and associated proteins [BR:
sthm03036
]
IS481_06275
03400 DNA repair and recombination proteins [BR:
sthm03400
]
IS481_06275
DNA replication proteins [BR:
sthm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
IS481_06275
Chromosome and associated proteins [BR:
sthm03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
IS481_06275
DNA repair and recombination proteins [BR:
sthm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
IS481_06275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
QPC32758
LinkDB
All DBs
Position
complement(1307239..1307583)
Genome browser
AA seq
114 aa
AA seq
DB search
MTRSDLVNQLAERFGQLTHRDTEFAVKTILDAMSDALARGHRIEIRGFGSFSINRRPPRI
GRNPRSGEQVVIPEKLVPHFKPGKALREAVDARTPPEPDAEAAAQDAARQEAAA
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgacccgatccgatctcgtgaaccagctggccgagcgcttcggccagctgacgcaccgc
gataccgagttcgcggtcaagaccatcctggacgcgatgtccgacgcgctcgcgcgcggg
caccgcatcgagatccggggcttcggcagcttctcgatcaaccgccgcccgccgcgcatc
gggcgcaacccgcgctccggcgagcaggtggtgatccccgagaagctggtgccgcacttc
aagcccggcaaggcgttgcgcgaggcggtcgacgcccgcaccccgcccgagccggatgcc
gaggctgcggcgcaggacgccgcccgacaggaagccgctgcgtga
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integrated database retrieval system
