Caldimonas thermodepolymerans: IS481_06280
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Entry
IS481_06280 CDS
T06911
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
IS481_06280 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sthm03011
]
IS481_06280 (rpsA)
Ribosome [BR:
sthm03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
IS481_06280 (rpsA)
Bacteria
IS481_06280 (rpsA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_PDCD11
Motif
Other DBs
NCBI-ProteinID:
QPC32759
LinkDB
All DBs
Position
complement(1307638..1309365)
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AA seq
575 aa
AA seq
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MSQTTQTAAAEGSESFAALFEESLKRSEMRSGEVITAEVVRVDYNFVVVNAGLKSEAYIP
IDEFRNDQGELEVQVGDFVSVAIDSIENGYGDTILSRDKAKRLASWLQLERALESGDFVS
GTVSGKVKGGLTVLVNGIRAFLPGSLIDTRPVKDMTPYEGKTLEFKVIKLDRKRNNVVLS
RRAVIEASMGEERAKLLETLTEGAIVHGVVKNITEYGAFVDLGGIDGLLHITDMAWRRVR
HPSEVVQVGQELTAKVLKFDAEKNRVSLGLKQMGDDPWVGVSRRYPAGTRLFGKVTNIAD
YGAFVEIEPGIEGLVHVSEMDWTNKNVAPSKIVALGDEVEVMVLEIDEDKRRISLGMKQC
KPNPWEEFAQNFKRGDRVKGPIKSITDFGIFVGLAAGIDGLVHLSDLSWNEPGEAAVRNY
KKGQEVEAVVLAIDVERERISLGIKQLDADPFSNYTAVHDRGATVTGTVKSVDARGAEIQ
LADDVTGYLRASEISRERVEDARNVLKEGDEVTALIINIDRKTRSIQLSIKAKDNAEQQE
ALQRLSAENRENAGTTSLGALLKAKLSDQQNNNNG
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaaccacccaaaccgccgcagccgaagggtcggaatcctttgccgccctgttc
gaagagtccctcaagcgctcggaaatgcgctccggcgaggtgatcacggccgaagtcgtc
cgcgtggactacaacttcgtcgtcgtgaacgccggcctcaagtccgaggcctacatcccc
atcgacgagttccgcaatgaccagggcgaactggaagtccaggtcggcgacttcgtctcg
gtggcgatcgactccatcgaaaacggctatggcgacaccattctgtcgcgcgacaaggcc
aagcgcctggcctcgtggctgcagctcgagcgcgcgctggaatccggcgacttcgtcagc
ggcacggtctccggcaaggtcaagggtggtctgacggtgctggtcaacggcatccgcgcc
ttcctgcccggctccctgatcgacacccgccccgtcaaggacatgacgccttacgagggc
aagacgctcgagttcaaggtcatcaagctcgaccgcaagcgcaacaacgtcgtgctgtcg
cgccgtgccgtcatcgaagcctcgatgggtgaagagcgcgccaagctgctcgagaccctg
accgaaggcgccatcgtccacggcgtggtcaagaacatcaccgaatacggtgcgttcgtc
gacctgggcggcatcgacggcctgctgcacatcaccgacatggcctggcgtcgcgtgcgc
cacccgagcgaggtggtgcaggtcggccaggagctgaccgccaaggtcctgaagttcgac
gccgagaagaaccgcgtctcgctgggcctgaagcagatgggtgacgacccctgggtcggc
gtctcgcgccgctacccggccggcacccgcctgttcggcaaggtcaccaacatcgccgac
tacggtgcgttcgtcgagatcgagccgggcatcgaaggcctggtgcacgtctccgagatg
gactggaccaacaagaacgtcgcgccgtccaagatcgtggcgctgggcgacgaggtcgag
gtcatggtcctggagatcgacgaggacaagcgccgcatctccctgggcatgaagcagtgc
aagccgaacccctgggaagagttcgcgcagaacttcaagcgcggcgaccgcgtcaagggc
ccgatcaagtcgatcaccgacttcggcatcttcgtgggcctggccgccggcatcgacggc
ctggtgcacctgtccgacctgtcctggaacgagccgggcgaagccgcggtgcgcaactac
aagaagggccaggaagtcgaagccgtcgtgctggccatcgacgtggaacgcgagcgcatc
tcgctgggcatcaagcagctcgacgccgatccgttcagcaactacacggccgtccatgac
cgcggcgcgaccgtcaccggtaccgtcaagtccgtggatgcccgcggcgccgagatccag
ctggccgacgacgtgaccggctacctgcgtgcctccgagatctcccgcgagcgcgtggaa
gacgcccgcaacgtgctgaaggaaggcgacgaggtcaccgcgctgatcatcaacatcgat
cgcaagacccgcagcatccagctgtcgatcaaggccaaggacaacgccgagcagcaggaa
gcgctgcaacgcctgtccgccgagaaccgcgagaacgccggcaccaccagcctcggcgcg
ctgctcaaggccaagctgagcgaccagcagaacaacaacaacggctga
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