Caldimonas thermodepolymerans: IS481_06310
Help
Entry
IS481_06310 CDS
T06911
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sthm
Caldimonas thermodepolymerans
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sthm03032
]
IS481_06310 (gyrA)
03400 DNA repair and recombination proteins [BR:
sthm03400
]
IS481_06310 (gyrA)
Enzymes [BR:
sthm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
IS481_06310 (gyrA)
DNA replication proteins [BR:
sthm03032
]
Prokaryotic type
DNA Topoisomerases
IS481_06310 (gyrA)
DNA repair and recombination proteins [BR:
sthm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IS481_06310 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
NTS
Motif
Other DBs
NCBI-ProteinID:
QPC32765
LinkDB
All DBs
Position
complement(1315359..1318001)
Genome browser
AA seq
880 aa
AA seq
DB search
MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMHELNNDWN
RPYKKSARIVGDVIGKYHPHGDSAVYDTIVRMAQDFSLRHMLVDGQGNFGSVDGDSAAAM
RYTEVRLAKIAHEMLADIDKETVDFGPNYDGSEKEPLVLPTRLPNLLVNGSAGIAVGMAT
NIPPHNLNEVVDACLHLLKNPEASIDELMEIIPAPDFPTAGIIYGLSGVREGYRTGRGKV
VMRAKCHFEDIDKGARQAIIIDEIPYQVNKKNLLERIAELVHEKKIEGISHIQDESDKSG
MRVVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALVDGQPKLCNLKDLLEIFLEHRRE
VVTRRTVFELRKARERGHVLEGLAVALANIDEFIQIIKNSPTPPIAKQELMSRAWDSSLV
REMLARAEQDTPGGRAAYRPEGLPPQYGLQPDGLYRLSDDQASEILQMRLQRLTGLEQDK
IIGEYKDVMAQIADLLDILARPERVTAIIAEELVALKQEFGQTKLGARRSEIEHNAQELD
TEDLIAPTDMVVTLSHAGYIKSQPLAEYRAQRRGGRGKQAAATKEDDWIDQLFIANTHDY
ILCFSNRGRVYWLKVWEVPQGGRNSRGKPIVNMFPLQQGEKINVVLPLTGEFRSFPEDHY
VFMCTAQGTVKKTALDEFSNPRKAGIIAVDLDEGDYLIGAALTDGKHDVMLFSDGGKAVR
FDENDVRPMGRNARGVKGMTLEEGQSVIAMLVAEDESQSVLTATENGYGKRTPITEYTRH
GRGTKGMIAIQQSERNGKVVAATLVRPEDEIMLITDKGVLVRTRVAEIRELGRATQGVTL
ISLDEGSKLSGLQRIVENDAGDKAEDEAADDTPPAGGADN
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgactcagttcgccaaagaaaccctcccgatcagcctcgaagaagagatgcggcgttcg
tacctcgattacgcgatgagcgtgatcgtgggacgcgccctgcccgatgcccgcgacggt
ctgaaaccggtgcaccggcgcgtgctgtacgcgatgcacgagctgaacaacgactggaac
cggccctacaagaagtctgctcgtatcgtcggtgacgtcatcggtaagtaccacccgcac
ggcgattcggcggtctacgacacgatcgtgcgcatggcgcaggatttctcgctgcgccac
atgctggtcgatggccaaggcaacttcggctcggtcgacggcgacagcgccgcggcgatg
cgctacaccgaagtccgcctggccaagatcgcccacgagatgctggccgacatcgacaag
gaaacggtcgatttcggccccaactacgacggctccgagaaagagccgctggtgctgccc
acccgcctgcccaacctgctggtcaacggctcggccggcatcgcggtgggcatggcgacc
aacatcccgccgcacaacctcaacgaggtggtggacgcctgcctgcacctgctgaagaac
cccgaggcgagcatcgacgagctgatggagatcatcccggcgccggacttccccaccgcc
gggatcatctacggcctgtcgggcgtgcgcgagggctaccgcaccggccgcggcaaggtg
gtgatgcgcgccaagtgccacttcgaggacatcgacaagggtgcgcgccaggccatcatc
atcgacgagatcccctaccaggtgaacaagaagaacctcctggagcggatcgccgagctg
gtccacgagaagaagatcgagggcatcagccacatccaggacgagtcggacaagtccggc
atgcgcgtggtcatcgagctcaagcgcggcgaagtcccggaggtggtgctcaacaacctg
tacaagcagacccagctgcaggacaccttcggcatcaacatggtcgccctggtggacggc
cagccgaagctgtgcaacctgaaggacctgctggagatcttcctcgagcaccggcgcgag
gtcgtcacccgccgcacggtgttcgagctgcgcaaggcgcgcgagcgcggccacgtgctg
gaaggcctggcggtggcgctggccaacatcgacgagttcatccagatcatcaagaactcg
cccaccccgccgatcgccaagcaggagctgatgagccgcgcctgggattcgtcgctggtg
cgcgagatgctggcgcgcgccgagcaggacaccccgggcggtcgcgccgcctaccgcccc
gaagggctgccgccacagtacggcctgcagcctgacgggctgtaccgcctgtccgacgac
caggccagcgagatcctgcagatgcgcctgcaacgcctgaccgggctggagcaggacaag
atcatcggcgagtacaaggacgtgatggcccagatcgccgacctgctggacatcctggcg
cgccccgagcgggtcaccgcgatcatcgccgaggagctggtcgctctgaagcaggagttc
ggccagaccaagctgggcgcgcggcgcagcgagatcgagcacaacgcgcaggaactcgac
accgaggacctgatcgccccgaccgacatggtcgtcacgctcagccacgccggctacatc
aagagccagccgctggccgagtaccgcgcgcagcgccgcggtggccgcggcaagcaggcg
gcggcgaccaaggaagacgactggatcgaccagctcttcatcgccaacacgcacgactac
atcctgtgcttctccaaccgcggccgggtctactggctgaaggtctgggaggtgccgcag
ggcgggcgcaacagccgcggcaagcccatcgtcaacatgttcccgctgcagcagggcgag
aagatcaacgtcgtgctgccgctgaccggcgagttccgcagcttccccgaagaccactac
gtcttcatgtgcaccgcgcagggcacggtcaagaagaccgcgctggacgagttcagcaac
ccgcgcaaggccggcatcatcgccgtcgacctggatgagggcgactacctgatcggcgcg
gcgctgaccgacggcaagcacgacgtgatgctgttctccgacggcggcaaggcggtgcgc
ttcgacgagaacgacgtgcgcccgatgggccgcaacgcgcgcggcgtcaagggcatgacg
ctcgaggaaggccagagcgtgatcgcgatgctggtggccgaggacgaatcccagagcgtg
ctgaccgccaccgagaacggctacggcaagcgcaccccgatcaccgagtacacccgccac
ggccgcggcaccaagggcatgatcgcgatccagcagtccgagcgcaacggcaaggtggtc
gccgccacgctggtgcgtccggaggacgagatcatgctgatcaccgacaagggcgtgctg
gtgcgcacccgggtggccgagatccgcgagctgggccgcgccacgcagggcgtgacgctg
atctcgctggacgagggctccaagctgagcggcctgcagcgcatcgtcgagaacgacgcg
ggcgacaaggccgaggacgaagcagccgacgacaccccgccggccgggggcgccgacaac
tga
DBGET
integrated database retrieval system
