Caldimonas thermodepolymerans: IS481_06945
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Entry
IS481_06945 CDS
T06911
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm00541
Biosynthesis of various nucleotide sugars
sthm01100
Metabolic pathways
sthm01250
Biosynthesis of nucleotide sugars
Module
sthm_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
IS481_06945 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sthm01005
]
IS481_06945 (kdsA)
Enzymes [BR:
sthm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
IS481_06945 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
sthm01005
]
Lipid A
IS481_06945 (kdsA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
Motif
Other DBs
NCBI-ProteinID:
QPC32876
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Position
complement(1448104..1448958)
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AA seq
284 aa
AA seq
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MQLCGFQVGLDQPFFLISGPCVVESEQLQMDTAGTLKEITSELGIPFIFKSSYDKANRSS
GSSFRGPGMEKGLEILAKVKRELGVPVLTDVHTEEEVPVVAQVVDVLQTPAFLCRQTDFI
RAVAQSGKPVNIKKGQFLAPHDMKNVIQKARDAAREKGLPEDNFMACERGASFGYNNLVS
DMRSLAIMRETGAPVVFDATHSVQLPGGQGTSSGGQREFVPVLSRAAVAVGVAGLFMETH
PDPSKALSDGPNAVPLKRMKDLLATLVELDRITKRNGFLENNFS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcagctttgcggcttccaggtcggtctcgaccaacccttcttcctgatctccggcccc
tgcgtcgtcgagtccgagcaactgcagatggacactgccggcacgctcaaggagatcacc
tcggagctgggcatcccgttcatcttcaagtccagctacgacaaggccaaccgctcctcg
ggcagctcgttccgcggccccggcatggaaaaaggcctggagatcctcgccaaggtcaag
cgcgaactgggcgtgccggtgctgaccgacgtgcacaccgaggaggaggtcccggtggtc
gcccaggtggtcgacgtgctgcagacgcccgccttcctgtgccgccagaccgacttcatc
cgcgccgtggcgcagtcgggcaagccggtcaacatcaagaagggccagttcctcgcgccg
cacgacatgaagaacgtcatccagaaggcccgcgacgccgcgcgcgagaagggcctgccc
gaggacaacttcatggcctgcgagcgcggcgccagcttcggctacaacaacctggtcagc
gacatgcggtcgctggcgatcatgcgcgagaccggtgccccggtggtgttcgacgccacc
cactcggtgcagctgcccggcggccagggcaccagctccggcggccagcgcgagttcgtg
ccggtgctctcgcgcgccgcggtggccgtcggcgtggcgggcctgttcatggaaacccac
cccgacccgagcaaggcgctcagcgacgggcccaacgccgtgccgctcaagcgcatgaag
gacctgctggccacgctggtcgagctcgaccgcatcaccaagcgcaacgggttcctggag
aacaacttcagctga
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