Caldimonas thermodepolymerans: IS481_07140
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Entry
IS481_07140 CDS
T06911
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IS481_07140 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sthm03400
]
IS481_07140 (uvrB)
DNA repair and recombination proteins [BR:
sthm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IS481_07140 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IS481_07140 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
AAA_16
AAA_22
Kinesin
AAA_25
Microtub_bd
DUF87
Motif
Other DBs
NCBI-ProteinID:
QPC32913
LinkDB
All DBs
Position
1490736..1492823
Genome browser
AA seq
695 aa
AA seq
DB search
MTEALTEVVSLDENKFVRFPDSPFQLYQPYPPAGDQPTAIEQLVEGVRDGLSFQTLLGVT
GSGKTYTMANVIARLGRPAIVFAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPEAY
VPQRDLFIEKDSSINEHIEQMRLSATKSLLERRDVVIVATVSAIYGIGKPEDYTQMRLIV
RTGDRLGQRDLIAQLIRMQYTRNEMDFGRGTFRVRGDTIDVFPAEHSELALRIELFDDEI
ESLALLDPLTGRIVQKIPRFVVYPSSHYVTPREQVLRAIEGIKEELRQRLDELVKAGKLV
EAQRLEQRTRFDLEMLQEVGHCKGIENYSRHLSGAKPGEPPPTLVDYLPPDALMFLDESH
VLIGQLGGMYNGDRARKEVLVEYGFRLPSALDNRPLKFEEFERKMRQAVFVSATPGDYEK
LHAGQVVEQVVRPTGLVDPVVEVRPATHQVDDVLQEIRERVEANERVLITTLTKRMAEQL
TDYLADNGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILD
ADKEGFLRAERSLIQTIGRAARNANGKAILYADRITDSMRRAIEETERRRAKQLAYNQAH
GITPRTVQKQVKELIDGVYSQDASRGAARAAEEVARVEALSEKDLGKRVKQLEKQMLEYA
RNLEFEKAARVRDQLAMLKQQAFGAGGGDNVAAAG
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagctctgacggaagtcgtgtcactggacgagaacaagttcgtccgcttcccg
gattcaccgttccagctctaccagccgtatccgccggccggcgaccagcccaccgcgatc
gagcagctggtcgagggggtgcgcgacgggctgtcgttccagaccctgctgggcgtgacc
ggctcgggcaagacctacacgatggccaacgtgatcgcccggctgggccgtccggccatc
gtgttcgcgccgaacaagacgctcgccgcgcagctgtacagcgagttccgcgagttcttc
ccgcgcaacgcggtcgagtacttcgtcagctactacgactactaccagcccgaggcctac
gtcccgcagcgcgacctgttcatcgagaaggacagctcgatcaacgagcacatcgagcag
atgcggctgtcggcgaccaagagcctgctggagcgccgcgacgtggtgatcgtggccacg
gtcagcgcgatctacggtatcggcaagcccgaggactacacgcagatgcggctgatcgtg
cgcaccggcgaccgcctggggcagcgcgacctgatcgcccagctgatccgcatgcagtac
acccgcaacgagatggacttcggacgcggcaccttccgcgtgcgtggcgacaccatcgac
gtgttccccgccgaacactcggagctggcgctgcgcatcgagctgttcgacgacgagatc
gaatcgctggcgctgctggatccgctgaccgggcgcatcgtgcagaagatcccgcgcttc
gtggtctacccgtcgagccactacgtgacgccgcgcgagcaggtgctgcgcgcgatcgag
ggcatcaaggaggagctgcgccagcgcctggacgagctggtcaaggccggcaagctggtc
gaggcgcagcgtctggagcagcgcacccgcttcgacctggagatgctgcaggaggtgggg
cactgcaagggcatcgagaactactcccggcacctctcgggtgccaagcctggcgagccg
ccgccgaccctggtggactacctgccgcccgacgcgctgatgttcctcgacgaaagccac
gtgctgatcggccagctgggcggcatgtacaacggcgaccgggcgcgcaaggaggtgctg
gtcgagtacggcttccgcctgccgtcggcgctggacaaccggccgctgaagttcgaggag
ttcgagcgcaagatgcgccaggcagtgttcgtctccgcgaccccgggcgactacgagaag
ctgcacgccgggcaggtggtcgagcaggtggtgcgccccaccggcctggtcgacccggtg
gtcgaggtgcgcccggccactcaccaggtggacgacgtgctgcaggagatccgcgagcgg
gtcgaggccaacgagcgggtgctgatcaccacgctgaccaagcgcatggccgagcagctg
accgactacctggccgacaacggggtcaaggtgcgctacctgcactcggacatcgacacc
gtcgagcgtgtcgagatcatccgcgacctgcgcctgggcaccttcgacgtgctggtgggc
atcaacctgctgcgcgagggcctggacatccccgaggtctcgctggtggccatcctggac
gccgacaaggaaggctttctgcgcgccgagcgctcgctgatccagaccatcggccgggcc
gcgcgcaacgccaacggcaaggccatcctgtacgccgaccgcatcaccgactcgatgcgc
cgcgcgatcgaggagaccgagcgccgccgcgccaagcagctggcctacaaccaggcgcac
ggcatcaccccgcgcaccgtgcagaagcaggtcaaggagctgatcgacggcgtctactcg
caggacgcgtcccgcggagcggcccgggcggccgaggaggtggcgcgggtcgaggcgctg
tccgagaaggacctgggcaagcgcgtcaagcagctcgagaagcagatgctcgagtacgcg
cgcaacctggagttcgagaaggccgcccgcgtgcgcgaccagctggccatgctcaagcag
caggccttcggtgcgggcggcggggacaacgtcgccgccgccggttga
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integrated database retrieval system
