Caldimonas thermodepolymerans: IS481_07185
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Entry
IS481_07185 CDS
T06911
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm03030
DNA replication
sthm03430
Mismatch repair
sthm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IS481_07185 (dnaQ)
03430 Mismatch repair
IS481_07185 (dnaQ)
03440 Homologous recombination
IS481_07185 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sthm03032
]
IS481_07185 (dnaQ)
03400 DNA repair and recombination proteins [BR:
sthm03400
]
IS481_07185 (dnaQ)
Enzymes [BR:
sthm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IS481_07185 (dnaQ)
DNA replication proteins [BR:
sthm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IS481_07185 (dnaQ)
DNA repair and recombination proteins [BR:
sthm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IS481_07185 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QPC32921
LinkDB
All DBs
Position
1499160..1499882
Genome browser
AA seq
240 aa
AA seq
DB search
MTRQIFFDTETTGLSPEGGDRIVEIGCVEMVDRRLTGNNKHYYLNPERPNSEDAVKIHGL
TDEFLADKPVFAAIADELLEYLAGAEIIIHNASFDVGFLDAELRRLGKPKFETYVAGITD
SLLMAREMFPGKSNSLDALCKRLEVDNSNRTLHGALLDAGLLAEVYIKMTRGQESLVIEA
EEDATQEIVVEKIDLTQFSLPVLCASDAEVQAHEAVLADLDKSSGGKTLWRQLPSEKVMA
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgacagatctttttcgacaccgaaaccaccggcctgagccccgaagggggtgac
cgcatcgtcgagatcggttgtgtcgagatggtggaccggcgcctgaccggcaacaacaag
cactactacctgaatccggagcggcccaacagcgaggacgcggtgaagatccacggcctg
accgacgaattcctggccgacaagccggtgttcgcggcgatcgccgacgagctgctcgag
tacctggccggcgccgagatcatcatccacaacgcgagcttcgacgtcggcttcctggac
gccgagctcaggcgcctaggcaagcccaagttcgagacctacgtcgcgggcatcaccgac
agcctgctgatggcccgcgagatgttcccgggcaagtcgaactcgctggacgcgctgtgc
aagcggctggaggtcgacaactccaaccgcacgctgcacggcgcgctgctggacgcggga
ctgctggccgaggtctacatcaagatgacccgcgggcaggagtcgctggtcatcgaggcc
gaggaagacgccacccaggaaatcgtggtggagaagatcgacctcacgcagttcagcctg
ccggtgctgtgcgcgagcgacgccgaggtgcaggcccacgaggcggtgctggcggacctg
gacaagtcctccggcggcaagacactgtggaggcagttgccgagcgaaaaagttatggca
taa
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