KEGG   Caldimonas thermodepolymerans: IS481_07695
Entry
IS481_07695       CDS       T06911                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
sthm  Caldimonas thermodepolymerans
Pathway
sthm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sthm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    IS481_07695 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sthm02044]
    IS481_07695 (tssM)
Secretion system [BR:sthm02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   IS481_07695 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: QPC33014
LinkDB
Position
complement(1632755..1636366)
AA seq 1203 aa
MKKLFGWIFNRWVMLALGLLALAAVIWIVGPLLAIGAWHPLEGTLARAGLIVLVALFVVG
KQAWTAWRARKASERLVQGFAQQAAQAPAPSAGAQEVEVIAGRFKEALETLRKSRLAGQA
GRFGRGYLYHLPWYVIIGAPGSGKTTALINSGLEFPLADRFGKEAIRGVGGTRNCDWWFT
NEAILLDTAGRYTTQDSSQQDDATAWTGFLQLLRRHRPRRPINGVLVTISVPDMLSHPAP
ERERYAQTVRQRVQELYQQLGVRIPVYLLVTKTDLLPGFIEYFDHLGKEERQQVLGFTLP
YQDQAPALEKEALGTTFESEFALLSKRLFEGSLERLEAERDPQRRALVYSFPQQFTALRE
VLGEFLVNAFAASKFDQPILLRGVYFTSGTQEDSPIDRIMGVLARSFKVERRALPPQKST
GRSYFLTRTLKGVIFQEAELAGTNLKWERRRTWLYRAAYVAIAVLGVGLLAAWGVSYVNN
RQYLAAVEQRIAPAAQTVQAIDPGTGADVLQLLPALNELRRLAIVDPVRPDLSAPASMQF
GLFQGDKVDAAARAAYQRLLDDAMLPKVARRIEDLLRSAQNRNPELMYEALKAYVMLYDS
EHYSAADLKDLVLADWETTLPREVGNEQRAELEAHLDVLLDRGVVMSPLPQDKALVEQSR
AALQRMSLAQRVYNRLKRVGVGADIPEFKITKAAGPAAGLVFTRASGEPLTKGVPGLYTY
DGYHKAFQAQADRVARQLFEEEGWVLGLSEQQRSATLRDAQGLARLMSDVKRLYLEDYAR
VWEFFINDIRLANRGTLTDTIQLVRTLSAPDSPLPPLLRAIVKETTLGEKIDGNTLERTT
STVRDRVSETRESLARLLGGDRQEPGASALPQRIESLVDDRFEALRRYVLAPAQGQPAPM
DGTMQLLNELYTLMTATETAVRGGGAPPPSDVPNKVRAEAGRAPEPVRALMNQAVTAGIT
QALGATRDHLSNQMQANIVEFCRQAIEGRYPFARGSNRDVTQDDFARLFAPGGLLDDFFQ
RNLLAFVDTSTRPWRFREVGGGMMGGSRDSAALAQFQRAQAIRDTFFRAGGNQPGLRLEF
KPVEMDAAITQFILDVDGQIVRYAHGPAVPTTVQWPGTGGRGQVRIQLSPPSASGSSGAV
FEGPWALFRMFDRVQIEGTGQPERFRAVFSVDGRRAVFEVTTSSVLNPFRMSELSSFSCP
GKL
NT seq 3612 nt   +upstreamnt  +downstreamnt
atgaagaagctgttcggctggatcttcaaccgttgggtgatgctcgcgctgggtctgctg
gccctggctgcggtcatctggatcgtcggcccgctgctggccatcggcgcctggcacccg
ctcgagggcacgctggcgcgcgccgggctgatcgtgctcgtcgccctgttcgtggtcggc
aagcaggcgtggacggcctggcgcgcgcgcaaggccagcgagcggctggtgcagggcttc
gcgcagcaggccgcccaggcacccgcgcccagcgccggcgcgcaggaagtcgaggtgatc
gcaggccgcttcaaggaggcactcgagacgctgaggaaatcccgcctggctggccaggcc
ggccgcttcggccgcggctacctgtaccacctgccctggtacgtgatcatcggcgcgccc
ggctcgggcaagaccaccgcgctgatcaactcggggctggagttcccgctggccgacagg
ttcggcaaggaagcgatccgcggcgtgggcggcacgcgcaactgcgactggtggttcacc
aacgaggccatcctgctcgacaccgccggccgctacaccacccaggacagcagccagcag
gacgacgccaccgcctggaccggcttcctgcagctgctgcgccgccatcgcccgcgccgg
ccgatcaacggggtgctggtgacgatcagcgtcccggacatgctgtcgcaccccgcaccc
gagcgcgagcgctacgcgcagaccgtgcgccagcgcgtgcaggagctgtaccagcagctg
ggcgtgcgcatcccggtctacctgctggtgaccaagaccgacctgctgcccggcttcatc
gagtacttcgaccacctcggcaaggaggagcgccagcaggtgctgggcttcaccctgccc
taccaggaccaggccccggccctcgagaaggaggcgctcggcacgaccttcgagagcgag
ttcgccctgctgtccaagcgcctgttcgagggatcgctggaacgcctggaggccgaacgc
gacccgcagcgccgcgcgctggtctacagcttcccgcagcagttcaccgcgctgcgcgag
gtgctgggcgagttcctggtcaacgccttcgccgcctcgaagttcgaccagcccatcctg
ctgcgcggcgtgtacttcaccagcggcacgcaggaagactccccgatcgaccgcatcatg
ggcgtgctggcgcgcagcttcaaggtcgagcgccgcgcgttgccgccgcagaagtccacc
gggcgcagctacttcctgacccgcacgctcaagggcgtgatcttccaggaggcggagctc
gccggcaccaacctgaagtgggaacgccggcgcacctggctgtaccgcgccgcctacgtg
gcgatcgccgtgctgggcgtcgggctgctggcggcctggggcgtcagctacgtcaacaac
cggcagtacctcgccgcggtcgagcagcgcatcgcgccggccgcgcagaccgtgcaggcc
atcgacccgggcaccggcgcggacgtgctgcagctgctgccggcgctcaacgagctgcgc
cggctggccatcgtcgatccggtgcgaccggacctgagcgcgccggccagcatgcagttc
ggcctgttccagggcgacaaggtcgacgccgccgcccgcgccgcctaccagcgcctgctc
gacgacgcgatgctgcccaaggtggcccgccgcatcgaggacctgctgcgctcggcgcag
aaccgcaaccccgagctgatgtacgaggcgctcaaggcctacgtgatgctctacgacagt
gagcactattcggccgccgacctcaaggacctggtgctggccgactgggaaacgaccctg
ccgcgcgaggtcggcaacgagcagcgcgccgagctggaagcccacctcgacgtgctgctg
gaccgcggcgtggtgatgtcgccgctgccgcaggacaaggcgctggtggagcagtcgcgc
gccgcgctgcagcgcatgtcgctggcccagcgcgtctacaaccgcctcaagcgcgtgggc
gtcggcgcggacatccccgagttcaagatcaccaaggccgccgggccggccgccgggctg
gtgttcacccgtgccagcggcgagccgctgaccaagggcgtgccgggcctgtacacctac
gacggctaccacaaggccttccaggcccaggccgaccgcgtcgcgcgccagctgttcgag
gaggaaggctgggtgctggggctgtcggagcagcagcgcagcgccacgctgcgcgacgcg
cagggcctggcgcggctgatgtccgacgtgaagcggctgtacctggaagactacgcccgg
gtctgggagttcttcatcaacgacatccggctggccaaccgcggcaccctgaccgacacc
atccagctggtgcgcacgctctccgcgcccgactcgccgctgccgccgctgctgcgcgcc
atcgtcaaggagaccacgcttggcgagaagatcgacggcaacacgctggagcgcaccacc
agcaccgtgcgcgaccgcgtctcggaaacccgcgagagcctggcgcgcctgctgggtggc
gaccggcaggagcccggcgcctcggccctgccgcagcgcatcgagagcctggtcgacgac
cgcttcgaggccttgcgccgctacgtgctcgccccggcgcagggccagccggccccgatg
gacggcacgatgcagctgctcaacgagctctacacgctgatgaccgccaccgagaccgcg
gtgcgcggtggcggcgctccgccgcccagcgacgtgccgaacaaggtgcgcgccgaagcc
ggccgcgcgcccgaaccggtgcgcgcactgatgaaccaggcggtgacggccggcatcacc
caggcgttgggcgccacccgcgaccacctgagcaaccagatgcaggcgaacatcgtcgag
ttctgccgccaggcgatcgaaggccgctacccgttcgcacgcggcagcaaccgcgacgtc
acgcaggacgacttcgcgcgcctgttcgcgccgggcgggctgctggacgacttcttccag
cgcaacctgctcgccttcgtcgacaccagcacgcggccgtggcgtttccgcgaggtgggc
ggcggcatgatgggcggctcgcgcgattcggcggcgctggcgcagttccagcgcgcgcag
gcgatccgtgacaccttcttccgcgccggcggcaaccagcccggcctgcgcctggagttc
aagccggtcgagatggatgccgcgatcacccagttcatcctcgacgtcgacggccagatc
gtgcgctacgcccacggtccggcggtgccgaccaccgtgcagtggcccggcaccggcggg
cgcgggcaggtacgcatccagctgtcgccgccctcggcgtcgggctcgtccggcgcggtg
ttcgaaggcccctgggccctgttccgcatgttcgaccgggtccagatcgagggcaccggg
cagcccgagcgcttccgcgcggtgttcagcgtcgacggacgccgtgcggtgttcgaggtg
accaccagcagcgtgctcaacccgttccggatgagcgagctgtccagcttcagctgcccc
ggcaagctatga

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