KEGG   Caldimonas thermodepolymerans: IS481_07750
Entry
IS481_07750       CDS       T06911                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
sthm  Caldimonas thermodepolymerans
Brite
KEGG Orthology (KO) [BR:sthm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sthm02044]
    IS481_07750 (tssF)
Secretion system [BR:sthm02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   IS481_07750 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: QPC33025
LinkDB
Position
1645888..1647762
AA seq 624 aa
MDPRLLRYYNQELQHLREMGAEFAQAFPKIAARLGMDGIEVSDPYVERLLEGFAFLAARV
QLKLDAEFPRFTQRLLEIVYPNYVAPVPAMVVAQFRPDLNDGNLARGFRIARGSMMRSQL
GKGDETPCQFRTAQDVTLWPVEIVSASYFSYAPDLPLAQLPVGRRVKGGVRLKLRATAGL
QFHQLPMEALRLYLAGGDEVAYKLYELLLGSALGVVVVPPQRPVPWHEVLPATSVAPVGF
SDDEALLPVGLRNFQGYRLLQEYYAFPQRFLMFDIQGLRPALQRCTGDEVEVVVLLERGD
ATLENVVDAGNFALHCTPAINLFERRCDRIHITANQHDYHVVPDRTKPMDFEVYDVTSVT
GYGVGAGSEHHFLPFYAAFHHEGHGHAAYYSLQREPRLLSAEQKRRGARSSYVGSEVYIS
LVDPAEAPFSEDLRQLAVTATCTNRDLPLHMPLGVGRTDFVLDMAAPVESVRVLKGPTRP
YSSLREGAVSWKFIHQLSLNYLSLLDVDEREGAAALREILTLYAQSADHGLLKQIDGLRS
VRTRPTVRRFPAPGPIAFGRGVEVDVEVDEFAFQGASAFLFGAVLAQFFTRYVSLNSFVE
TSLRSTSRGELMRWVPRCGSRAIL
NT seq 1875 nt   +upstreamnt  +downstreamnt
atggatcctcgcctgcttcgctactacaaccaggagctgcagcacctgcgcgagatgggt
gcggagttcgcgcaggcgttccccaagatcgcggcgcgcctggggatggacggcatcgag
gtctccgacccctacgtcgagcgcctgctggaggggttcgcgttcctggccgcacgggtg
cagctcaagctggacgccgagttcccgcgcttcacgcagcggttgctcgagatcgtctac
cccaactacgtcgcgccggtgccggcgatggtggttgcccagttccggcccgacctgaac
gacggcaacctggcgcgcggcttccgcatcgcgcgcggcagcatgatgcgcagccagctc
ggcaagggcgacgagacgccgtgccagttccgcactgcgcaggacgtgacgctgtggccg
gtcgagatcgtctcggcctcgtacttctcctacgcgccggacctgccgctggcgcagctg
ccggtcggccggcgcgtcaagggcggggtgcggctcaagctgcgcgcaaccgccgggctg
cagttccaccagctgccgatggaggcgctgcgcctgtacctggccggcggcgacgaggtg
gcctacaagctgtacgagctgctgctgggcagcgcgctcggcgtggtggtggtgccgccg
cagcgtccggtgccgtggcacgaggtgctgccggcgaccagcgtcgcgccggtcggcttc
tcggacgacgaggcactgttgccggtgggcctgcgcaacttccagggctaccggctgctg
caggagtactacgccttcccgcagcgcttcctgatgttcgacatccaggggctgcggcct
gcgctgcagcgctgcaccggcgacgaggtcgaggtcgtcgtgctgctcgaacgcggcgac
gcgacgctggagaacgtggtcgacgccggcaacttcgcactccactgcaccccggcgatc
aacctgttcgagcgccgctgcgaccgcatccacatcacggccaaccagcacgactaccac
gtggtgccggaccgcaccaagccgatggacttcgaggtctacgacgtcacctcggtgacc
ggctacggcgtgggcgcgggcagcgaacaccatttcctgccgttctacgccgccttccac
cacgaaggccacgggcatgcggcctactacagcctgcagcgcgagccgcgcctgctgtcg
gccgagcagaagcgccgcggcgcgcgctccagctacgtgggcagcgaggtctacatctcg
ctggtcgacccggcggaagccccgttcagcgaggacctgcgccagctcgcggtcaccgcg
acctgcaccaaccgcgacctgccactgcacatgccactcggggtggggcggaccgacttc
gtgctggacatggccgccccggtcgagtcggtgcgcgtgctcaagggaccgacgcggccg
tactcctcgctgcgcgagggcgcggtcagctggaagttcatccaccagctgtcgctgaac
tacctctcgctgctcgacgtcgacgagcgcgaaggcgccgcggcgctgcgggagatcctg
accctgtatgcccagagcgcggaccacggcctgctcaagcagatcgacggcctgcgctcg
gtgcgcacgcgtccgaccgtgcggcgcttcccggcgcccgggccgatcgccttcgggcgc
ggcgtcgaggtcgacgtcgaggtcgacgagttcgccttccagggggcgagcgccttcctg
ttcggcgcggtgctggcgcagttcttcacgcgctacgtgtcgctgaattcctttgtcgag
acctcgctgcggtcgaccagccgcggcgagctgatgcgatgggtgccccgatgcggaagc
cgcgcgatcctgtga

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