KEGG   Caldimonas thermodepolymerans: IS481_07760
Entry
IS481_07760       CDS       T06911                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
sthm  Caldimonas thermodepolymerans
Pathway
sthm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sthm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    IS481_07760 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sthm02044]
    IS481_07760 (tssH)
Secretion system [BR:sthm02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   IS481_07760 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 AAA_22 Zeta_toxin Sigma54_activat AAA_7 nSTAND3 NBD_SMAX1 TniB NACHT AAA_25 AAA_18 DUF815 ATPase_2 AAA_24 CbiA Hpr_kinase_C Cyclin_N
Other DBs
NCBI-ProteinID: QPC33027
LinkDB
Position
1648839..1651556
AA seq 905 aa
MSEISRVALFGKLNSVAYKAVEGATVFCKLRGNPYVELEHWVAQIVQLPDSDWHRIIRHF
GLDASVLAKDITAALDRLPRGATSISDLSDHVTNAVERGWVYGSLKYGESQVRTGHVMVG
LLKTSFLRNALLAISRQFERIRPDDLAEDFGKIVAGSPEEGLAPTDGSSLSGGAAPGEAS
GALPAAQMGKQEALKRFTVDLTEQARSGRMDPIVGRDDEIRQVVDILMRRRQNNPILVGE
AGVGKTAVVEGFAQRIVRGDVPPALKDVELRALDVGLLQAGASMKGEFEQRLRSVIEEVQ
ASPKPIILFVDETHTLVGAGGQAGTGDAANLLKPALARGTLRTIGATTWAEYKKYIEKDP
ALTRRFQNVQVDEPDERRAILMMRGVASTMEKHHKVQILDEALEAAVRLSHRYIPARQLP
DKAVSLLDTACARVAVSLHATPAEVDDSQRRIEALETELGIIAREQSIGIDTGQRRAECE
AALAAERERLAALTQRWETEKGLVDRLLALRAQLRAGAQPVEGTGSALEAAAEGATESPL
GEAERAALLQELRSVQAQLAEVQGENPLILPTVDYQAVASVVADWTGIPVGRMARNEIET
VLNLPALLGQRVIGQDHAMEMIAKRIQTTRAGLDNPNKPIGVFLLAGTSGVGKTETALAL
AEALYGGEQNLVTINMSEFQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRKPYSVVLLDE
VEKAHPDVHEIFFQVFDKGFMEDGEGRFIDFKNTLILLTTNAGTDLIASMCKDPELMPDP
EALAKALREPLLKVFPPALLGRLVVIPYYPLSDEMLGRIVRLQLGRIKKRIEERHKVPFE
YGEDVIRLVVSRCTESESGGRMIDAILTNTMLPDLSRAFLNAMMEGRQLERVKVDVQDGN
FTYSF
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgagcgaaatcagccgcgtcgcgctgttcggcaagctcaacagcgtggcctacaaggcc
gtcgaaggcgccaccgtgttctgcaagctgcggggcaacccgtacgtggagctggagcac
tgggtcgcgcagatcgtgcagctgcccgacagcgactggcaccgcatcatccggcacttc
ggactggacgcctcggtgctggccaaggacatcacggcggcgctggaccggctgccgcgc
ggcgcgacctcgatctccgacctgtcggaccacgtcaccaacgcggtcgagcgcggctgg
gtgtacggctcgctgaagtacggcgaatcgcaggtgcgcaccggccacgtgatggtcggg
ctgctcaagacctcgttcctgcgcaacgcgctgctggcgatctcgcgccagttcgagcgc
atccgcccggacgacctggccgaggacttcgggaagatcgttgcgggctcgcccgaggaa
gggctggcaccgaccgacggctcgtcgctgtccggcggcgcggcccccggcgaggcgagc
ggtgcgctgccggccgcccagatgggcaagcaggaggcgctcaagcgcttcaccgtggac
ctgaccgagcaggcccgctccggcaggatggaccccatcgtcgggcgcgacgacgagatc
cgccaggtcgtcgacatcctgatgcggcggcgccagaacaaccccattctggtcggcgag
gctggcgtgggcaagaccgcggtggtcgagggcttcgcgcagcgcatcgtgcgcggcgac
gtgccgccggcgctgaaggacgtggagctgcgcgcactggacgtgggcctgctgcaggcc
ggtgccagcatgaagggcgagttcgagcagcgcctgcgctcggtgatcgaggaggtgcag
gcctcgcccaagccgatcatcctgttcgtcgacgagacccatacgctggtcggggcaggt
ggccaggcaggcaccggtgacgcggccaacctgctcaagccggcgctcgcgcgcggcacg
ctgcgcaccatcggcgcgacgacctgggccgagtacaagaagtacatcgagaaggacccg
gcgctgacgcgacgcttccagaacgtgcaggtcgacgagcccgacgagcgccgcgcgatc
ctgatgatgcgtggcgtggcctcgacgatggagaagcaccacaaggtgcagatccttgac
gaggcgctggaagccgcggtcaggctctcgcaccgctacatcccggcgcgccagctgccg
gacaaggcggtcagcctgctcgacaccgcctgcgcgcgggtggccgtgagcctgcacgcg
acgccggccgaggtggacgacagccagcggcgcatcgaggcgctggagaccgagctgggc
atcatcgcgcgcgagcagagcatcggcatcgacaccgggcagcgccgcgccgaatgcgag
gcggcactggccgcagagcgcgagcgcctggccgcgctgacgcagcgctgggaaaccgag
aagggcctggtggaccggctgctcgcgctgcgcgcccagctgcgcgccggcgcccagccg
gtggagggcaccggcagcgcgctggaagcggcggccgaaggcgccaccgagtcgccgctg
ggcgaggccgagcgcgccgcgctgctgcaggagctgagatcggtgcaggcccagctggcc
gaggtgcagggcgaaaacccgctgatcctgcccaccgtggactaccaggccgtggccagc
gtggtggccgactggaccggcatccccgtgggccgcatggcgcgcaacgagatcgagacg
gtgctgaacctgccggcgctgctcggccagcgggtgatcggccaggaccacgcgatggag
atgatcgccaagcgcatccagaccacgcgcgccggcctggacaaccccaacaagccgatc
ggcgtgttcctgctggcgggcacctcgggcgtgggcaagaccgagaccgcgctggcgctg
gccgaggcgctgtacggcggcgagcagaacctggtgacgatcaacatgagcgagttccag
gaggcgcacaccgtctccacgctcaagggtgcgccaccggggtacgtcggctacggcgaa
ggtggggtgctgaccgaggcggtgcggcgcaagccgtacagcgtggtgctgctcgacgag
gtcgagaaggcgcacccggacgtgcacgagatcttcttccaggtgttcgacaagggcttc
atggaggacggcgagggccgcttcatcgacttcaagaacacgctgatcctgctgacgacc
aacgccggcaccgacctgatcgccagcatgtgcaaggacccggagctgatgcccgatccc
gaggcgctggccaaggcgctgcgcgagccgctgctgaaggtcttcccgcccgcgctgctg
gggcggctggtggtgatcccgtactacccgctgagcgacgagatgctcggccgcatcgtg
cggctgcagctcggccgcatcaagaagcgcatcgaggaacggcacaaggtgccgttcgag
tacggcgaggacgtgatccggctggtggtgtcgcgctgcaccgaaagcgagtcgggcggc
cgcatgatcgacgccatcctcaccaacaccatgctgcccgacctgtcgcgcgccttcctc
aacgcgatgatggaaggccgccagctcgaacgcgtcaaggtcgacgtccaggacggcaac
ttcacctacagcttctga

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