Caldimonas thermodepolymerans: IS481_07825
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Entry
IS481_07825 CDS
T06911
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sthm
Caldimonas thermodepolymerans
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sthm02000
]
IS481_07825
Transporters [BR:
sthm02000
]
Other transporters
Pores ion channels [TC:
1
]
IS481_07825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
Motif
Other DBs
NCBI-ProteinID:
QPC33040
LinkDB
All DBs
Position
1665611..1666558
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AA seq
315 aa
AA seq
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MNMRAPFILHTVAAACVAFAVSACGDKPSEAPAAPPSAAGTAAPAGNEVLFEANQNVAVT
GPAFIEWRDQMLAQGEGKLLQVTGRAYANESGSGGEDLGQARAEAASILFMEKLDPERIV
LKSETLPGDPPSGRFEAVRFEWIDAPADAVAGAEAGAEPASGEEAATSVAAAPAPEPAAP
AAEPAPAAEPVPAPAPAASPAPAAADSVRALVLYFDTGSATPRLGAEERKQLQALVASAG
EGGINVVGHADSRGAPEFNRTLSAARAEAVKRLLVRLGAKAEAVQTSGQGSDQPVESNDA
AAGRAKNRRVEISVM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgcgagcccctttcatcctgcacaccgtcgctgcggcctgcgtcgcgttcgcg
gtgtcggcctgcggcgacaagccgtccgaggcgccggccgcgccaccgtctgcagccggc
actgccgcgccggcgggcaacgaggtgctgttcgaggcgaaccagaacgtggcggtcacc
ggcccggccttcatcgaatggcgcgaccagatgctggcccagggcgagggcaagctgctg
caggtcaccggacgggcctacgccaacgagagcggcagcggcggcgaggacctcgggcag
gcacgcgccgaggcggccagcatcctgttcatggaaaagctcgatcccgagcgcatcgtg
ctgaagtcggagaccctgcccggcgatccgccctccggccgcttcgaggcggtgcgcttc
gagtggatcgacgccccggccgacgcagtggccggcgccgaggccggagccgagcccgcg
agcggcgaggaggcggccacgagcgtggcggcggcaccggctccggaaccggcagcaccg
gcagccgaacctgcgccggccgccgagccggtccccgcgcccgcgccggccgccagtccc
gcgcctgcggccgccgacagcgtgcgcgcgctggtgctgtacttcgacaccggcagcgcc
accccgcgcctgggcgccgaggagcgcaagcagctgcaggcgctggtggcttcggccggc
gaggggggcatcaacgtggtcggccatgcggacagccgcggtgcccccgagttcaaccgg
accctgagcgccgcgcgggccgaggcggtcaagcgcctgctggtgcgcctgggcgcgaag
gccgaggcggtgcagaccagcggccagggctcggaccagccggtcgaaagcaacgacgcg
gcagccggccgggcgaagaaccggcgggtcgagatcagcgtgatgtga
DBGET
integrated database retrieval system
