Caldimonas thermodepolymerans: IS481_08215
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Entry
IS481_08215 CDS
T06911
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
sthm
Caldimonas thermodepolymerans
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sthm03021
]
IS481_08215 (nusA)
03009 Ribosome biogenesis [BR:
sthm03009
]
IS481_08215 (nusA)
Transcription machinery [BR:
sthm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
IS481_08215 (nusA)
Ribosome biogenesis [BR:
sthm03009
]
Prokaryotic type
rRNA transcription factors
IS481_08215 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KH_NusA_C
KH_KhpA-B
RNA_pol_A_CTD
KH_1
Motif
Other DBs
NCBI-ProteinID:
QPC33114
LinkDB
All DBs
Position
1748593..1750071
Genome browser
AA seq
492 aa
AA seq
DB search
MNRELLMLVDAISREKSVDREVVFGAVEAALASATKKLYDGEVDIRVSIDRETGDYETFR
RWHVVPDEAGLQQPDSEILLFEAREQIPDIEVDDYIEEPVESVPIGRIGAQAAKQVILQK
IRDAEREQLLNDFLARGDKIFVGTVKRIDKGDLIVESGRVEGRLKRSEMIPKENLRTGDR
VRAVILEVDRTARGPQIMLSRSAPAFMVELFRQEVPEIEQGLLEIKSCARDPGSRAKIAV
VSHDKRVDPIGTCVGVRGSRVNAVTNELAGERVDIVLWSEDPAQFVIGALAPANVQSIVV
DEEHHSMDVVVDEENLAIAIGRGGQNVRLASELTGWRINIMTAEESQAKQAEETQAIRTL
FMEKLDVDEEVANILIEEGFTSLEEVAYVPIQEMLEIEAFDEDTVNELRNRAKDVLLTME
IAKEEKVEEVSQDLRDLEGLDAETIAKLADGGIHTRDDLADLAVDELTELTGMDEARAKA
LIMKAREHWFAV
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcgaactgttgatgctggtcgatgccatctcgcgcgagaagagcgtggaccgc
gaagtggtgttcggtgccgtcgaggccgcgctggcgtctgcgaccaagaagctgtacgac
ggcgaggtggacatccgcgtctccatcgaccgcgagaccggcgactacgagaccttccgt
cgttggcacgtggtgcctgacgaggccgggctgcagcagcccgactcggaaatcctgctg
ttcgaggcccgcgagcagatcccggacatcgaggtcgacgactacatcgaggagccggtg
gagtcggtgccgatcggccgcatcggcgcgcaggccgccaagcaggtgatcctgcagaag
atccgcgacgccgagcgcgagcagctgctcaacgacttcctggcgcgcggcgacaagatc
ttcgtcggcacggtcaagcgcatcgacaagggggacctgatcgtcgagtccggccgcgtg
gaaggccgcctgaagcgctcggagatgatcccgaaggagaacctgcgcaccggcgaccgt
gtgcgcgcggtgatcctggaggtcgaccgcaccgcgcgcggcccgcagatcatgctgtcg
cgcagcgcgccggcgttcatggtcgagctgttccgccaggaagtgcccgagatcgagcag
ggcctgctggagatcaagagctgcgcccgcgaccccggctcgcgcgccaagatcgccgtc
gtctcgcacgacaagcgcgtcgacccgatcggcacctgcgtgggcgtgcgcggctcgcgc
gtgaacgccgtgaccaacgagctggccggcgagcgcgtggacatcgtgctgtggtccgag
gacccggcgcagttcgtgatcggtgcgctggcgccggcgaacgtgcagtccatcgtggtc
gacgaggagcaccactcgatggacgtggtggtcgacgaggagaacctcgcgatcgccatc
ggccgtggcggccagaacgtgcgcctggcttcggagctgaccggctggcgcatcaacatc
atgacggcggaggaatcccaggccaagcaggccgaggagacccaggcgatccgcacgctg
ttcatggaaaagctggatgtggacgaggaagtcgccaacatcctgatcgaggaaggcttc
accagcctggaggaagtggcctacgtgccgatccaggagatgctggagatcgaggccttc
gatgaagacaccgtcaacgagctgcgcaaccgtgccaaggacgtgctcctgacgatggag
attgccaaggaagagaaagtcgaggaagtgtcgcaggacctgcgcgatctggaaggcctc
gatgccgagacgatcgccaagcttgccgacgggggcatccacacccgcgacgacctggcc
gatctggccgtcgacgaactgaccgagctcacgggcatggacgaggcgcgtgccaaggcg
ctgatcatgaaggcccgggagcactggttcgccgtctga
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