Caldimonas thermodepolymerans: IS481_08230
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Entry
IS481_08230 CDS
T06911
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sthm
Caldimonas thermodepolymerans
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sthm03016
]
IS481_08230 (truB)
Enzymes [BR:
sthm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IS481_08230 (truB)
Transfer RNA biogenesis [BR:
sthm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IS481_08230 (truB)
Prokaryotic type
IS481_08230 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DUF7595
Motif
Other DBs
NCBI-ProteinID:
QPC33117
LinkDB
All DBs
Position
1753579..1754559
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AA seq
326 aa
AA seq
DB search
MDATTTTAQGTRPRLPRRAVHGVLLLDKPLGLSSNDALQKARRLYRAEKAGHTGTLDPLA
TGLLPLCFGAATKFSQVSLEADKTYRARLRLGVRTTTGDAEGEVLAERPVQVTREQVLTA
CARFTGEIDQVPPMYSALKRDGKALYEYARAGIEVEREPRRVTIHRIDVLDFRGDEVEIE
VRCSKGTYVRTLAEDIGEALGCGAHLVALRRTGTGPLTLEGAVTLEQLEAMDEAGRDRLL
RPVDELLADWPVVRLEAEDAGRFLSGMRRRVALPDAPQVRVYGPQPGAFLGSARIRGGEL
ISTRLLSPLEVEGLLNAQASKHRHPS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggacgccacgacgacgactgcccagggcacgcggccacgactgccgcgccgtgccgtc
catggcgtgctgctgctcgacaagccgctgggcctgagcagcaacgacgcgctgcagaag
gccaggcggctgtaccgtgccgagaaggccggccacaccggcacgctggatccgctggcc
accgggctgctgccgctgtgcttcggcgcggcgaccaagttctcgcaggtcagcctcgag
gccgacaagacctaccgcgcgcgcctgcggctgggcgtgcgcacgaccaccggcgatgcc
gaaggcgaggtgctggccgagcgccccgtgcaggtgacgcgcgagcaggtgctcaccgcc
tgcgcgcgcttcaccggcgagatcgaccaggtgccgccgatgtactcggcgctcaagcgc
gacggcaaggcgctgtacgagtacgcgcgtgccggcatcgaggtcgagcgcgagccgcgg
cgggtcacgatccaccgcatcgacgtgctggatttccggggcgacgaggtggagatcgag
gtgcgctgcagcaagggcacctacgtgcgcacgctggccgaggacatcggcgaggcgctg
ggctgcggcgcgcacctcgtcgcgctgcggcgcaccggcaccggcccgctgaccctggaa
ggcgccgtcacgctggagcagctggaggcgatggacgaggccggccgcgaccggctgctg
cgtcccgtcgacgagctgctggccgactggcccgtcgtgcggctggaggccgaggacgcc
gggcgcttcctcagcggcatgcggcgacgcgtggcgctgcccgatgcgccgcaggtgcgc
gtctacggcccgcagccgggggccttcctcggcagcgcccgcatccggggcggcgaactg
atttcaacgcggctgttgagcccgctggaggtcgaaggacttctgaacgctcaagcatcc
aagcatcgacacccatcatga
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