Caldimonas thermodepolymerans: IS481_08855
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Entry
IS481_08855 CDS
T06911
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K01420
CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Organism
sthm
Caldimonas thermodepolymerans
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sthm03000
]
IS481_08855
Transcription factors [BR:
sthm03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
IS481_08855
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
Crp
DUF8462
Sigma70_r4
NirdL-like_HTH
GntR
Motif
Other DBs
NCBI-ProteinID:
QPC33383
LinkDB
All DBs
Position
1874151..1874930
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AA seq
259 aa
AA seq
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MLSIAAPTPAVVRVPHTARHVDRAAPQTAGAHIAEALKLLQDTLPIQRRLVHAGDTIYQA
GERFGCLHVVHSGIFKIITYSADGREQVAGFHFKGDWMGFDGIANGRYGCDAVAMDTAEV
WSFRYDTLLQACVEHPELLALVHAAMSREITRDRDSLLSLCTLSADARVADFLRYWAESL
AARGLRTDQITLRLTRAEIGNYLGMKLETVSRAMSRLAREKVIRFAERGRRELQIPDIDA
LREFVQRSLGAPAASRTLQ
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgctttcgattgctgcccccacccctgccgttgtccgcgttccgcacacggcccggcat
gtcgatcgcgcggcgccccagacggccggtgcacacattgccgaggcgttgaagctgctg
caggacaccctgccgatccagcgtcgcctggtgcatgccggggacacgatctaccaggcg
ggcgagcgcttcggctgcctgcacgtggtgcattcgggcatcttcaagatcatcacgtac
tcggccgacggtcgcgagcaggtcgccggcttccacttcaagggcgactggatgggcttc
gacggcatcgccaacggccgctacggctgcgacgcggtggcgatggacacggccgaggtg
tggtcgttccgctacgacacgctgctgcaggcctgtgtcgagcatcccgagctgctggcg
ctggtacacgccgcgatgagccgcgagatcacccgcgaccgtgactcgctgctgtcgctg
tgcacgctgtccgccgatgcgcgcgtggccgacttcctgcgctactgggccgagtcgctc
gccgcacgcggcctgcgcaccgaccagatcacgctgcgcctgacccgcgccgagatcggc
aactacctgggcatgaagctggagaccgtcagccgcgcgatgtcgcgcctggcgcgcgag
aaggtgatccgctttgccgaacgcggccgccgcgaactgcagatcccggacatcgacgcg
ctgcgcgagttcgtgcagcgcagcctgggtgcaccggcggcctcgcgcacgctccagtga
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