Caldimonas thermodepolymerans: IS481_08860
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Entry
IS481_08860 CDS
T06911
Name
(GenBank) GAF domain-containing protein
Organism
sthm
Caldimonas thermodepolymerans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GAF_2
GAF
HATPase_c
Response_reg
GAF_3
PAS_9
PAS
HisKA
PAS_8
PAS_4
Diguanyl_cycl_sensor
PAS_7
Autoind_bind
Motif
Other DBs
NCBI-ProteinID:
QPC33228
LinkDB
All DBs
Position
complement(1874931..1877021)
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AA seq
696 aa
AA seq
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MPGDLPPGSVRPDVDHPSVFRALFKAYPDALLLVDATGQIVMANPMASDLLGYAPDELVG
LPVEALVPDAIRPRHAAYRAAYGVNPRPRPMGTQMELVAKRRDGSEVMVEIALSPLHGEG
LPYVVAAIRGIGAYPRVKQALQRARYSEHVAQMGRLAVDTRDPQLLLQQVPAVAVNGLEA
DLCAIFLLEPDRLAFRVASGIGLLDEEHVGARVPNLPDTPLGYVLNAGRPVVIENYAAEQ
RFSVPDAYLRAGLVSAVAVPLSDRGRAIGVLTVRSRRAQTFGDDEIRFVESLANLVASTL
QRAQSEEALQHAQRLESVGQLTGGIAHDFNNLLTIIQGNLQVLEEHPAVEGDAYAQQLVA
AAARASRRGAELTGKLLAFSRRQVLRPSRVDVVTMLQSLADMLRRTLDQRVRIEVDAAPD
CPPCLADPGQLESALLNIAINARDAMPEGGLISFSCRPCETLPAAALSDLDTDAPPMHAF
VAIAISDTGTGMPDAVKERAFEPFFTTKEPGRGTGLGLSTVYGFVKQSHGAILIDSALGA
GTTVTLYIPRYQERQAAGSGDESGAGLLPPGLKVLLVEDEPEVRAVAQAFLQGLGCRVIA
CANAEQALVRLGTEPELDALLSDVALGPGMRGTELVRQVRARRPKLAVLLMSGYSSELAQ
ADVSDPGLRCELLPKPFTKAALAQALARALAAVRAG
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgcctggcgaccttccccccggctcggtgcgacccgacgtcgaccacccgagcgtcttc
cgcgccctgttcaaggcctatcccgacgcgctgctgctggtcgacgcgaccggccagatc
gtgatggccaacccgatggcctcggacctgctcggctacgccccggacgaactggtcggc
ctgccggtcgaggccctggtgcccgacgcgatccggccgcgccatgcggcctaccgcgcg
gcctacggcgtcaacccgcggccacggcccatgggcacgcagatggagctggtggccaag
cgccgcgacggcagcgaggtgatggtcgagatcgcgctcagcccgctgcacggcgagggc
ctgccgtacgtggtggccgcgatccgcggcatcggcgcctacccgcgcgtcaagcaggcg
ttgcagcgcgcccgctacagcgaacacgtggcgcagatggggcggctggcggtcgacacg
cgcgacccgcagctgctgttgcagcaggtgccggcggtggccgtcaacggcctggaagcc
gacctgtgcgcgatcttcctgctcgagcccgaccggctcgcgttccgcgtggccagcggc
atcgggctgctggacgaggaacatgtcggggcgcgcgtgcccaacctgcctgacacgccg
ctcggctacgtgctcaacgccggccggccggtggtcatcgagaactatgctgccgagcag
cgcttctcggtgcctgacgcctaccttcgcgccggcctggtgagcgcggtggcggtgccg
ctgtccgaccgcggccgcgccatcggcgtgctgaccgtgcgctcgcgccgcgcacagacc
ttcggcgacgacgagatccgcttcgtcgagtcgctcgccaacctggtggcctcgacgctg
cagcgcgcgcaaagcgaggaggcgctgcagcacgcccagcgcctggaaagcgtcggccag
ctgaccggcggcatcgcgcacgacttcaacaacctgctgaccatcatccagggcaacctg
caagtgctggaggaacaccccgccgtcgagggcgacgcgtacgcgcagcagctggtggcg
gctgccgcgcgggccagccggcgcggcgccgagctcaccggcaagctgctcgccttctcg
cgccgccaggtgctgcggccgtcgcgggtggacgtcgtgacgatgctgcagtcgctggcc
gacatgctgcgccgcaccctggaccagcgcgtgcgcatcgaggtcgacgcggcccccgac
tgcccgccctgcctggccgacccgggccagctggaatcggcgctgctcaacatcgcgatc
aacgcgcgcgacgcgatgcccgaggggggcctgatctcgttcagctgccgcccctgcgag
acgctgcctgcggccgctctcagcgacctggacaccgacgccccgccgatgcatgcgttc
gtcgccatcgcgatcagcgacaccggcaccggcatgcccgacgcggtcaaggagcgcgcc
ttcgagcccttcttcaccaccaaggagccgggccgcggcacggggctggggttgagcacg
gtgtacggcttcgtcaagcagtcgcacggcgccatcctgatcgacagcgcgctgggcgcg
ggcaccaccgtgacgctctacatcccgcgctaccaggagcgccaggccgcgggcagcggg
gacgagagcggagccggcctgctgccgccaggactgaaggtgctgctggtggaggacgag
ccggaggtgcgcgccgtcgcgcaggccttcctgcaaggactggggtgccgcgtgatcgcc
tgtgccaacgccgaacaggcgctggtgcggctgggcacggaacccgaactggacgcgctg
ctcagcgacgtcgcgctcggccccggcatgcgcggcacggagctggtgcgccaggtgcgc
gctcgccgcccgaagctggcggtgctgctgatgtcgggctactcgtcggaactggcgcag
gccgacgtcagcgaccccggcctgcgttgcgagctgctgcccaaaccgttcaccaaggcc
gcgttggcccaggcgctggcgcgggccctggcggccgtgcgcgcagggtga
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