Caldimonas thermodepolymerans: IS481_08970
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Entry
IS481_08970 CDS
T06911
Symbol
glgX
Name
(GenBank) glycogen debranching protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm00500
Starch and sucrose metabolism
sthm01100
Metabolic pathways
sthm01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
IS481_08970 (glgX)
Enzymes [BR:
sthm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
IS481_08970 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Motif
Other DBs
NCBI-ProteinID:
QPC33248
LinkDB
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Position
complement(1903061..1905220)
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AA seq
719 aa
AA seq
DB search
MRSSDREAPITAVWPGKPYPRGATWDGEGVNFAVFSEHAEKVELALFDPSGRRERQRVTM
KECTDHVWHCYLPEARPGQTYGYYVHGPYRPEEGHRFNPHKLLVDPYAKDFVGELRWNDA
LYGYTVGHRKEDLSFDRRDSAPYLPKCRVLEAAFTWGEDRRPEIPWHDMVIYELHVRGFS
MLNPKVPEPLRGTYAGLGSAPSVSYLKHLGITTVELMPVHSFVNDRYLAEKGLQNYWGYN
TFGFLAPVMRYSYSRKVKEFKTMVKSLHSAGIEVILDVVYNHTCEGNQLGPTLSLRGIDN
AAYYMLSEENPRYYNDFTGCGNTLNLMHPRVLQMVMDSLRYWVEEMHVDGFRFDLASALA
RERGRVEHLGGFFDVIRQDPTLNRVKLIAEPWDLGHGGYQVGNFPLGWAEWNDRYRDGMR
AYWKGDGGLIGEFATRLTGSSDLYGRSGKRPHASINFITVHDGFTLHDLVSYNDKHNEAN
GEDNRDGNNHNLSWNCGAEGPTDDPGINALRERQKRNMLATLLLSQGVPMLLAGDERGHT
QHGNNNAYCQDNEISWIDWTPTPEREALQQFVRRLIELRCGHPTFRRRDFFEGKALLGGH
LKDLLWLKPDGTEMGTEAWEHEHARCLGVYLAGAGLDDVSPHGEPLQDDDFLVLFNAHES
EIAFHMPPLEGAPWTALVDTRHDTGEAPPTQHARGEHYPLQGRSLAVLTRPMHTPATPG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgagatcctccgaccgagaagcgccgatcaccgccgtctggccgggcaagccctatccg
cgcggggcgacctgggacggcgaaggcgtcaacttcgccgtgttctccgaacacgccgag
aaggtcgagctggcgctgttcgacccctcgggccgacgcgagcgccagcgcgtcacgatg
aaggagtgcaccgaccacgtgtggcactgctacctgcccgaagcccgccccgggcagacc
tacggctactacgtgcacgggccttaccggccggaggaggggcaccggttcaatccgcac
aagctgctggtcgacccgtacgccaaggacttcgtcggcgagctgcgctggaacgacgcg
ctgtacggctacaccgtcggccacaggaaggaggacctgtcgttcgaccgccgtgacagc
gccccctacctgcccaagtgccgggtgctggaagccgccttcacctggggcgaggaccgc
cgccccgagatcccgtggcacgacatggtcatctacgagctgcacgtgcgcgggttctcg
atgctcaacccgaaggtgccggagccgctgcgcggcacctacgccgggctggggtcggcg
ccctcggtcagctacctcaagcacctgggcatcaccacggtcgagctgatgccggtgcat
tccttcgtcaacgaccgctacctggccgagaaggggctgcagaactactggggctacaac
accttcggcttcctggctccggtgatgcggtattcgtactcgcgcaaggtcaaggaattc
aagaccatggtcaagagcctgcactcggcaggcatcgaggtcatcctcgacgtggtctac
aaccacacctgcgaaggcaaccagctcggcccgacgctgtcgctgcgcggcatcgacaac
gcggcctactacatgctgtcggaggagaacccgcgctactacaacgacttcaccggctgc
ggcaacacgctcaacctgatgcacccgcgcgtgctgcagatggtgatggactcgctgcgc
tactgggtcgaggagatgcacgtcgacggcttccgcttcgacctggcctcggcactggca
cgcgagcggggcagggtggagcacctgggcggcttcttcgacgtgatccggcaggacccg
acgctcaaccgagtcaagctgatcgccgaaccctgggacctggggcatggcggctaccag
gtcggcaacttcccgctcggctgggccgagtggaacgaccgctaccgcgacggcatgcgc
gcctactggaagggggacggcgggctgatcggggagttcgccacgcggctgaccggctcg
tcggacctgtatggccgctccggcaagcgcccgcacgccagcatcaacttcatcaccgta
cacgacggcttcacgctgcacgacctggtctcctacaacgacaagcacaacgaagccaac
ggcgaggacaaccgcgacggcaacaaccacaacctgtcgtggaactgcggcgccgaaggg
ccgaccgacgaccccggcatcaacgcgctgcgcgagcgccagaagcgcaacatgctggcc
acgctgctgctgtcgcagggggtgccgatgctgctggccggcgacgagcgcgggcacacg
cagcacggcaacaacaacgcctactgccaggacaacgagatcagctggatcgactggacg
cccacacccgagcgcgaggcgctgcagcagttcgtgcgccggctgatcgagctgcgttgc
ggccacccgaccttccgccggcgcgacttcttcgagggcaaggccctgctgggcgggcac
ctgaaggacctgctgtggctcaagcccgacggcaccgagatgggcaccgaggcctgggaa
cacgagcatgcccgctgcctgggcgtctacctggccggcgccgggctggacgacgtctct
ccgcacggcgagccgctgcaggatgacgatttcctggtcctgttcaacgcgcacgagagc
gaaatcgccttccacatgccgccgctggaaggcgcgccgtggaccgcgctggtcgacacg
cgccacgacaccggcgaagcgccgcccacgcagcacgcacgcggtgaacactacccgctg
caggggcgatcgctcgcggtgctgacgcgccccatgcacacgccggccaccccggggtaa
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