Caldimonas thermodepolymerans: IS481_09130
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Entry
IS481_09130 CDS
T06911
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
sthm
Caldimonas thermodepolymerans
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
IS481_09130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
HHH_7
S1_RRP5
T2SSK
DUF460
HHH_6
Motif
Other DBs
NCBI-ProteinID:
QPC29985
LinkDB
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Position
complement(1944285..1946672)
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AA seq
795 aa
AA seq
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MANCAPSFLGTTGTRVLDKILLQIAAELNVRPAQVNAAVELLDGGATVPFIARYRKEATG
GLDDTQLRELETRLTYLRELEERRQAVIKSIEEQGKLTPELRAAIEAAPTKQELEDIYLP
YKPKRRTKAMIAREAGIEPLADKLFADPTLDPVAEAQAFLNPDAGFADAFAVLDGVRDIL
SERWAEDAVLVGKLREWLWEEGLFQSKLMDGKDPNNPDVAKFRDYFDYSEPIRTVPSHRA
LAVFRGRTQEILEAKLVLDEEVVPGQPTLAEGRIARHLGWSHAKRPADELIRKTIAWTWK
VKLSLSLERDLFSRLREEAEKTAIKVFAENLRDLLLAAPAGKRVVMGLDPGIRTGVKVAV
VNETGKVVDTATVYPHEPRNDWEGAIHTLGRLCATHGVSLIAIGNGTASRETDKLAADLI
KRIQQMAQGTRIDKVVVSEAGASVYSASEYASKELPDLDVSLRGAVSIARRVQDPLAELV
KIEPKSIGVGQYQHDVNQAELARSLNAVVEDCVNSVGVDLNTASTPLLARVSGLSATVAA
SIVRWRDTHGAFRNRQQLLEVAGLGPKTFEQAAGFLRIRDGDNPLDMSGVHPETYPVVEK
ILQHVGKPITEVMGRSDVIRSLKPEAFADEKFGAITVRDILAELEKPGRDPRPDFKVARF
NDGVEDIKDLQPGMVLEGTVSNVAQFGAFVDLGVHQDGLVHVSQLSHKFVNDAREVVKAG
DIVKVKVLEVDLARKRISLTMKLDAAAPRGGADRGDNSYRPAGRGERYSAPRGAQAQPQS
AMAAAFAKLQQQTKR
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactgcgccccttcttttctaggaaccactgggacgcgagtgctggacaagatc
cttcttcaaatcgcggcggaactgaacgtccgccccgcccaagtcaatgccgccgtcgaa
ctgctggacggcggcgccacggtgcccttcatcgcgcgctaccgcaaggaagcgaccggc
ggcctggacgacacccagttgcgcgagctggagacgcgcctgacctacctgcgcgagctc
gaggagcgtcgccaggccgtcatcaagagcatcgaggagcagggcaagctcacgcccgag
ctgcgcgcggccatcgaggcggcgccgaccaagcaggagctggaagacatctacctgccg
tacaagcccaagcgccgcaccaaggcgatgatcgcccgcgaggccggcatcgagccgctg
gccgacaagctgttcgccgacccgacgctggacccggtggccgaggcccaggccttcctg
aacccggacgccggctttgccgacgccttcgcggtgctcgacggcgtgcgcgacatcctg
tccgagcgctgggccgaggacgccgtgctggtcggcaagctgcgcgagtggctgtgggag
gagggcctgttccagtcgaagctgatggacggcaaggacccgaacaaccccgacgtcgcc
aagttccgcgactacttcgactacagcgagccgatccgcaccgtgccctcgcaccgggcg
ctggcagtgttccgcggccgcacgcaggagatcctcgaagccaagctggtgctggacgag
gaagtggtgccgggccagcccacgctggccgaaggccgcatcgcgcgtcacctgggctgg
agccacgccaagcggccggccgacgagctgatccgcaagaccatcgcctggacctggaag
gtcaagctgagcctgagcctggagcgcgacctgttctcgcgcctgcgcgaggaggcggag
aagaccgcgatcaaggtgttcgccgagaacctgcgcgacctgctgctggccgcgccggcc
ggcaagcgcgtggtgatgggcctggacccgggcatccgcaccggcgtcaaggtcgcggtg
gtcaacgagaccggcaaggtggtcgacaccgccacggtctacccgcacgagccgcgcaac
gactgggagggtgccatccacacgctgggccggctgtgcgccacgcacggcgtcagcctg
atcgcgatcggcaacggcaccgccagccgcgagaccgacaagctggcggccgacctgatc
aagcgcatccagcagatggcccagggcaccaggatcgacaaggtcgtggtcagcgaggcg
ggtgcctcggtgtattcggcctcggaatacgcgagcaaggagctgccggacctggacgtg
agcctgcgcggcgcggtcagcatcgcgcgccgggtgcaggatccgctggccgagctggtg
aagatcgagcccaagagcatcggcgtgggccagtaccagcacgacgtcaaccaggccgag
ctggcgcgcagcctgaacgccgtggtcgaggactgcgtgaactcggtcggcgtggacctg
aacaccgcctcgacgccgctgctggcgcgcgtctcggggctgagcgccaccgtggcggcg
agcatcgtgcgctggcgcgacacccacggtgcgttccgcaaccgccagcagctgctcgag
gtggccggcctgggcccgaagaccttcgagcaggcagccggcttcctgcgcatccgcgac
ggcgacaacccgctggacatgtccggcgtccacccggagacctatccggtggtcgagaag
atcctgcagcacgtcggcaagcccatcaccgaggtcatgggccgttcggacgtgatccgc
agcctcaagccggaggccttcgccgacgagaagttcggcgcgatcacggtcagggacatc
ctcgccgagctggagaagcccggtcgcgacccgcgcccggacttcaaggtggcgcgcttc
aacgacggcgtcgaggacatcaaggacctgcagcccggcatggtgctggaaggcacggtc
agcaacgtcgcgcagttcggcgctttcgtcgacctgggcgtgcaccaggacggcctggtg
cacgtcagccagctgtcgcacaagttcgtcaacgacgcgcgcgaggtggtcaaggccggc
gacatcgtcaaggtgaaggtgctggaggtggacctggcccgcaagcgcatctcgctgacg
atgaagctggatgcagccgcgccgcgcggcggcgcggaccggggcgacaacagctaccgc
ccggccggccgcggcgagcgctacagcgccccgcgcggcgcgcaggcccagccccagtcg
gcgatggcggcggccttcgcgaagctgcagcagcagaccaagcgctga
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