Caldimonas thermodepolymerans: IS481_09335
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Entry
IS481_09335 CDS
T06911
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
sthm
Caldimonas thermodepolymerans
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sthm03036
]
IS481_09335 (smc)
Chromosome and associated proteins [BR:
sthm03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
IS481_09335 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
SMC_hinge
AAA_15
FPP
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QPC30022
LinkDB
All DBs
Position
complement(1993482..1996997)
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AA seq
1171 aa
AA seq
DB search
MRLNSIKLSGFKSFAEPTHFQLPGQLVGVVGPNGCGKSNIMDAVRWVLGESKASELRGES
MQDVIFNGSSNRKPASRASVELVFDNSDARAGGQWNQFTEIAVKRVLTRDGTSSYFINNQ
PVRRRDVQDVFLGTGLGPRAYAIIGQGTISRIIESKPEELRMFLEEAAGVSKYKERRRET
ENRLKDTRENLTRVEDILRELNANLEKLEKQAEVATQYRTLQEQGTLKLHQLWFLKHRDA
ASEQERLHKEVLEATNALEARLAELRHVEAELETIRQAHYAASDELHTAQAALAEANLEV
SRLEERIRYVVEGRQRVEQRLVELKAQSEQWAQRRADAEAELETIAEQIAQAEEQAEILA
AQAEEQAANLPGYEDAVRAATQRANEQRSAVANVQQQIQLLAAESRNVEEQARQLTLRRE
RLASEVKGLAAPDELRLAELTRQHEQAAEALAIAEERLHELTEQVPQLDEDRRAKQEQVN
AETARQADLSARLEALRALQEKVQTEGKLKPWLAKHGLDGLPGLWTQVHIEPGWETALES
ALRERLNALEVGRVETVRAFASDAPPAKLAFYTLPSAAISNTHQTLPRLSDLLRLNDAGL
KALLNDWLEGVYTAASLDEALAERGKLTHGEVIMTREGHAVSQYSVSFYAPDSEQAGMLQ
RAQEIENLERQVRAQALIAEDARTALVRAEAAYTDATQRLAGARREAAELQSRAYQLQVE
LLRLTQQAEQTSARRGQIEEELAEIDGQLEELNERRATGEARFEELDMALANEQERHAEL
EEAVIEAERKLNEAREQLRSLEREAQEAQFSARALAARRGELQRSIETANQQIALNEQTA
QQLQSELDGFNDAAAQAGLEEALAVKLDRESALAAKRSEYDDLAAKLRRAEEQRMEFERS
LQPLRDRITKLQLEEQAASLGGAQFMEQLTQAGVDLEALQKSIEEGNVKLYGLQGEIDRI
NREINALGAVNLAALDELAAARERKTFLDAQSSDLNDAIRTLEDAIHKIDMETRDLLKKT
FDIVNEHFGKLFPSLFGGGNAKLVMTGDEILDSGVQVMAQPPGKKNSTIHLLSGGEKALT
AIALVFAMFQLNPAPFCLLDEVDAPLDDANTERYANLVKSMSKNTQFLFISHNKIAMEMA
EQLIGVTMQEQGVSRIVAVDMEAAISMAEAA
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgaactcgatcaagctgtccggcttcaagtccttcgccgagccgacccacttc
cagctgcccggccagctcgtcggcgtggtcggccccaacggttgcggcaagtccaacatc
atggacgccgtgcgctgggtgctgggggagtccaaggcgtccgagctgcgcggcgagtcg
atgcaggacgtcatcttcaacggttccagcaaccgcaagccggccagccgcgccagcgtc
gagctggtgttcgacaacagcgacgcgcgcgccggcgggcagtggaaccagttcaccgag
atcgccgtcaagcgcgtgctcacgcgtgacggcacctccagctatttcatcaacaaccag
ccggtgcgccgccgcgacgtgcaggacgtgttcctgggcacgggcctgggcccgcgcgcc
tacgcgatcatcggccagggcacgatcagccgcatcatcgagtccaagcccgaggagctg
cgcatgttcctcgaggaggccgccggcgtctcgaagtacaaggagcgccgccgcgagacc
gagaaccggctcaaggacacgcgcgagaacctcacccgcgtcgaggacatcctgcgcgag
ctcaacgccaacctcgagaagctcgagaagcaggccgaggtcgcgacccagtaccgcacg
ctgcaggagcagggcacgctgaagctgcaccagctgtggttcctgaagcaccgcgacgcg
gccagcgagcaggagcgcctgcacaaggaggtgctggaggccaccaacgcgctggaggcg
cgcctggccgagctgcgccacgtcgaggccgagctggagaccatccggcaggcccactat
gccgccagcgacgagctgcacaccgcgcaggccgcgctggccgaggccaacctggaggtc
agccgcctggaagagcgcatccgctacgtggtcgagggtcgccagcgggtcgagcagcgc
ctggtcgagctcaaggcccagagcgagcagtgggcgcagcggcgcgccgatgcagaggcc
gaactggaaaccatcgccgagcagatcgcgcaggccgaggaacaggccgagatcctcgcc
gcgcaggccgaggagcaggcggccaacctgcccggctacgaggacgcggtgcgtgcggcc
acccagcgcgccaacgagcagcgatcggccgtcgccaacgtgcagcagcagatccagctg
ctggcggccgagtcgcgcaacgtcgaggaacaggcgcgccagctgacgctgcgccgcgag
cgcctggcgagcgaggtcaaggggctggccgcgcccgacgagctgcgcttggccgagctg
acccgccagcacgagcaggccgccgaggcgctggcgattgccgaggaacgcctgcacgag
ctgaccgagcaggtgccgcagctcgacgaggaccgccgcgccaagcaggagcaggtcaac
gccgagaccgccaggcaggccgacctgagcgcccgcctggaggcgctgcgcgcactgcag
gagaaggtgcagaccgaaggcaagctcaagccgtggctggccaagcacgggctggacggg
ctgccgggcctgtggacccaggtgcacatcgagccgggctgggaaaccgcgctggaatcg
gcactgcgcgagcggctcaacgcgctggaggtcggccgggtcgagaccgtgcgcgccttc
gcgagcgacgccccgccggccaagctggcgttctacacgctgccgtcggcggcgatcagc
aacacccaccagacgctgccgcgcctgtcggacctgctgcgcctgaacgacgcagggctc
aaggcgctgctcaacgactggctggaaggcgtctacaccgctgcctcgctggacgaggcg
ctggccgagcgcggcaagctcacgcacggcgaggtcatcatgacccgcgaggggcatgcg
gtgtcccagtactcggtgagcttctacgccccggactccgagcaggccgggatgctgcag
cgcgcgcaggagatcgagaacctggagcgccaggtacgcgcccaggccctgatcgccgaa
gacgcccgcaccgcgctggtgcgcgccgaggccgcctacaccgacgccacgcagcggctg
gccggcgcgcgccgcgaggccgccgagctgcagtcgcgcgcctaccagctgcaggtcgag
ctgctgcgcctgacccagcaggccgagcagaccagcgcccggcgcgggcagatcgaggag
gaactcgccgagatcgacggccagctcgaggagctcaacgagcgccgcgccaccggcgag
gcgcgcttcgaggagctcgacatggcgctggccaacgagcaggagcgccacgccgagctg
gaagaggcggtgatcgaggccgagcgcaagctcaacgaggcgcgcgagcagctgcgttcg
ctggagcgcgaggcccaggaggcgcagttctcggcgcgcgcgctggccgcgcggcggggc
gagctgcagcgctcgatcgagacggccaaccagcagatcgcgctcaacgagcagaccgcg
cagcagctgcagtccgagctggacggcttcaacgacgccgcggcgcaggccggcctggag
gaagccctggccgtcaagctggaccgcgagtcggcgctggcggccaagcgcagcgagtac
gacgacctggccgccaagctgcgccgcgccgaggagcagcgcatggaattcgagcgcagc
ctgcagccgctgcgcgaccgcatcaccaagctgcagctggaagagcaggccgcgtcgctc
ggcggcgcgcagttcatggagcagctgacccaggccggggtcgacctggaggcgctgcag
aagtccatcgaggaaggcaacgtcaagctctacggcctgcagggcgagatcgaccgcatc
aaccgcgagatcaacgcgctgggcgcggtcaacctcgcggcgctggacgaactggccgcc
gcgcgcgagcgcaagaccttcctggatgcgcagtcgtcggacctgaacgacgcgatccgc
acgctggaagacgcgatccacaagatcgacatggagacgcgcgacctgctgaagaagacc
ttcgacatcgtcaacgagcacttcggcaagctcttccccagcctgttcggcggcggcaac
gcgaagctggtgatgaccggcgacgagatcctcgattccggcgtgcaggtcatggcccag
ccgccgggcaagaagaacagcaccatccacctgctgtccggcggtgagaaggcgctgacc
gcgatcgcgctggtgttcgcgatgttccagctcaacccggcgccgttctgtctgctcgac
gaggtggatgccccgctcgacgacgccaacaccgagcgttatgccaacctggtcaagagc
atgtccaagaacacgcagttcctgttcatctcgcacaacaagatcgcgatggaaatggcc
gagcagctgatcggcgtgacgatgcaggagcagggcgtctcccgcatcgtggcggtcgac
atggaagccgcgatcagcatggcggaggcagcgtga
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