Caldimonas thermodepolymerans: IS481_09715
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Entry
IS481_09715 CDS
T06911
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IS481_09715 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sthm03032
]
IS481_09715 (dnaB)
Enzymes [BR:
sthm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
IS481_09715 (dnaB)
DNA replication proteins [BR:
sthm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
IS481_09715 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
divDNAB
AAA_22
DUF5410
Motif
Other DBs
NCBI-ProteinID:
QPC30093
LinkDB
All DBs
Position
complement(2079936..2081372)
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AA seq
478 aa
AA seq
DB search
MSAIPSGTEFPGAAPRSGGADDEVARLRVPPHSIEAEQSVLGGLLLDNGAWDRAGDLLTD
SDFYRYEHRLIYTAIGALINASKPADVITVYEHLQSLGKAEECGGLQYLNALAQSVPSAA
NLRRYAEIVRERAVLRKLVAASDEIATAAFNPQGRPVSQILDEAEGKIFKIGEEGSRAKQ
GFHSMDSLVVELLDRVQELAENGAEDVTGVRTGFFDLDRMTAGLQPGDLIILAARPSMGK
TAFALNIAEHVAVNEGLPVVVFSMEMGAAQLALRVVGSLGRIDQQHLRTGALRDDEWSRL
SEAVERLRNASIFIDETPGLSPSELRARARRQARQCGQLGLIVVDYLQLMSGSSNTSEEN
RATVIGEISRGLKALAKELRCPVIALSQLNRSVESRTDKRPMMSDLRESGAIEQDADVIM
FIYRDEYYTKEACKEPGVAEIIIGKQRNGPVGTVKLAFLKPLTKFENLAPGSFGGDEY
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccatcccgagcggtaccgaatttcctggggcggcgccgcgcagcggcggcgcc
gacgacgaggtcgcgcgcctgcgcgtgccgccgcattcgatcgaggcagagcagagcgtg
ctgggcggcctgctgctggacaacggcgcctgggaccgggcgggcgacctgctgaccgac
agcgacttctaccgctacgagcaccgcctgatctacacggcgatcggggcgctgatcaac
gccagcaagccggccgacgtgatcaccgtctacgagcacctgcagagcctgggcaaggcc
gaggagtgcggtggcctgcagtacctgaacgcgctggcccagagcgtgcccagcgccgcg
aacctgcgccgctatgccgagatcgtgcgcgagcgcgccgtgctgcgcaagctggtggct
gccagcgacgagatcgccaccgcggccttcaacccgcagggccggccggtgtcgcagatc
ctcgacgaggccgagggcaagatcttcaagatcggcgaggagggctcgcgcgccaagcaa
ggcttccattcgatggactccctggtcgtcgagctgctggaccgggtgcaggaactggcc
gagaacggtgccgaggatgtcacgggcgtgcgtaccggcttcttcgacctggaccgcatg
acggccggcctgcagccgggcgacctgatcatcctggcggcgcgcccgtcgatgggcaag
accgcgttcgcgctgaacatcgccgagcacgtggcggtcaacgaggggctgccggtggtg
gtgttctcgatggaaatgggggcggcccagctggcgctgcgggtggtcggttcgctcggc
cgcatcgaccagcagcacctgcgcaccggcgccttgcgcgacgacgaatggtcgcgcctg
tcggaggcggtggagcggctgcgcaacgccagcatcttcatcgacgagacgccgggcctg
tcgccgagcgagctgcgtgcccgggcgcggcgccaggcgcgccagtgcggccagctcggc
ctgatcgtggtcgactacctgcagctgatgagcggcagcagcaacaccagcgaggagaac
cgggcgaccgtgatcggcgagatctcgcgcggcctcaaggcgctggccaaggagctgcgc
tgcccggtgatcgcgctgtcgcagctcaaccgcagcgtggaatcgcgcaccgacaagcgg
ccgatgatgtccgacctgcgcgaatcgggcgccatcgagcaggacgcggacgtgatcatg
ttcatctaccgcgacgagtactacaccaaggaagcctgcaaggagccgggcgtcgccgag
atcatcatcggcaagcagcgtaacggcccggtgggcaccgtgaagctggccttcctgaag
ccgctgaccaagttcgagaacctggctcccggcagcttcggcggcgacgagtactga
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