Caldimonas thermodepolymerans: IS481_09945
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Entry
IS481_09945 CDS
T06911
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K15539
cytoskeleton protein RodZ
Organism
sthm
Caldimonas thermodepolymerans
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
IS481_09945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RodZ_C
HTH_25
HTH_31
HTH_19
SH3_4
Motif
Other DBs
NCBI-ProteinID:
QPC30133
LinkDB
All DBs
Position
complement(2125997..2126920)
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AA seq
307 aa
AA seq
DB search
MTEADRSTAAPGAPAQSAGEMLKAARLAQGVHIAALAASIKVSVKKLEALEADQFDQLPD
PTFARALAQTVCRFLKVDPAPILARLPEPGTPSRLEHVARGLNQPFRDGSSHAGDGVVLS
ALSRPAVWVPLLLIVAAVVLWLLPPGMLTLPGNWSRDDVAAPAAGNGTVTSTVPVMPPTD
APASETVHSAPLVVDPPPQPSPGAAPAAPSAPAAQPVPAAPPAAAPQAAEAPVVVRTTAE
SWMEVRDANGRVLLSRLVAPGETLTFGGSFPLRMRVGNAGATEVVVRGQPFDMTPFVRDN
VARFEVK
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggcggaccgcagcacggcggcacccggcgcgccggcacagtcggccggcgag
atgctcaaggcggcgcgcctggcgcagggggtgcacatcgccgcgctggccgcctcgatc
aaggtcagcgtcaagaagctcgaggcgctcgaggccgaccagttcgaccagctgcccgat
cccacgttcgcgcgggcgctggcgcagaccgtctgccgtttcctcaaggtcgatcctgcg
cccatcctggcgcggctgcccgaacccggcacgccgtcgcggctggagcacgtcgcgcgc
gggctcaaccagccgttccgcgatggctcgtcgcacgccggcgacggcgtggtcctgtcg
gcgctgtcgcgcccggcggtgtgggtgccgctgctgctgatcgtcgccgccgtcgtgctg
tggctgctgccgcccgggatgctgacgctgccgggcaactggtcgcgcgacgacgtcgcc
gcacctgccgcggggaacggcacggtcaccagcaccgtgccggtgatgccgccgaccgac
gcgcccgcgtccgagaccgtgcattccgcaccgctggtcgtcgacccgccaccgcagccg
tcgccaggtgcggccccggccgcgccgtcggcgcctgctgcccagccggtgccggccgct
cccccggcggccgcgccgcaggcggccgaggcgccggtggtggtgcgcaccacggccgag
agctggatggaggtgcgcgatgccaacggccgcgtgctgctgtcgcgcttggtggcgccc
ggcgagacgctcaccttcggtggcagctttccgctgcgcatgcgggtcggcaatgcgggc
gcgaccgaggtcgtcgtgcggggccagccgttcgacatgaccccgttcgtgcgcgacaac
gtggcccgtttcgaggtcaagtaa
DBGET
integrated database retrieval system
