KEGG   Caldimonas thermodepolymerans: IS481_10005
Entry
IS481_10005       CDS       T06911                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sthm  Caldimonas thermodepolymerans
Pathway
sthm00010  Glycolysis / Gluconeogenesis
sthm00020  Citrate cycle (TCA cycle)
sthm00260  Glycine, serine and threonine metabolism
sthm00280  Valine, leucine and isoleucine degradation
sthm00310  Lysine degradation
sthm00380  Tryptophan metabolism
sthm00620  Pyruvate metabolism
sthm00630  Glyoxylate and dicarboxylate metabolism
sthm00640  Propanoate metabolism
sthm00670  One carbon pool by folate
sthm00785  Lipoic acid metabolism
sthm01100  Metabolic pathways
sthm01110  Biosynthesis of secondary metabolites
sthm01120  Microbial metabolism in diverse environments
sthm01200  Carbon metabolism
sthm01210  2-Oxocarboxylic acid metabolism
sthm01240  Biosynthesis of cofactors
Module
sthm_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sthm_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sthm_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sthm_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sthm00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    IS481_10005 (lpdA)
   00020 Citrate cycle (TCA cycle)
    IS481_10005 (lpdA)
   00620 Pyruvate metabolism
    IS481_10005 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    IS481_10005 (lpdA)
   00640 Propanoate metabolism
    IS481_10005 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    IS481_10005 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    IS481_10005 (lpdA)
   00310 Lysine degradation
    IS481_10005 (lpdA)
   00380 Tryptophan metabolism
    IS481_10005 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    IS481_10005 (lpdA)
   00670 One carbon pool by folate
    IS481_10005 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sthm04147]
    IS481_10005 (lpdA)
Enzymes [BR:sthm01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     IS481_10005 (lpdA)
Exosome [BR:sthm04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   IS481_10005 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 AlaDh_PNT_C FAD_binding_2 FAD_oxidored HI0933_like NAD_binding_8 GIDA FAD_binding_3 Amino_oxidase 3HCDH_N Thi4 2-Hacid_dh_C zf-UBP Lycopene_cycl
Other DBs
NCBI-ProteinID: QPC30143
LinkDB
Position
complement(2138807..2140237)
AA seq 476 aa
MSNKQFDVVVIGGGPGGYIAAIRAAQLGFNTACIDEWKNAKGGPAPGGTCTNVGCIPSKA
LLQSSEHYEQAGHHFAEHGISLSNLSMDVAKMLARKDAVVKQNNEGILYLFKKNKVTFFH
GRGSFVKAGGIGYELKVSGANEEVIEARHVIVATGSNARALPGVPFDEQNVLSNDGALRI
PEVPKKLGVIGSGVIGLEMGSVWRRLGADVTILEALPTFLGAADEQVAKEALKVFTKQGL
KIQLGVKVNEVKNGAKGVTVSYTDAKGEAQTLEVDKLIVSIGRVPNTNGLNPEAVGLKLD
ERGAIVVDDQCRTNLPNVWAVGDVVRGPMLAHKAEEEGVAVAERIAGQHGHVNFDTIPWV
IYTSPEIAWVGKTEQQLKAEGRAYKAGSFPFMANGRARALGDTTGFVKFLADAKTDEILG
VHIIGPYASELIAESVVAMEFKASAEDIARICHAHPSLSEATKEAALAVDKRTLNF
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgagcaacaagcaattcgacgtcgtcgtcatcggcggcggcccgggcggctacatcgcc
gccatccgtgcggcgcagctgggcttcaacacggcctgcatcgacgagtggaagaacgcc
aagggcggtcccgccccgggcggcacctgcaccaacgtcggctgcatcccgtccaaggcg
ctgctgcagtcgtccgagcactacgagcaggccggccatcactttgccgagcacggcatc
tcgctgtccaacctgtcgatggacgtggcgaagatgctggcccgcaaggatgcggtcgtg
aagcagaacaacgaaggcatcctgtacctgttcaagaagaacaaggtgaccttcttccac
ggccgcggctcgttcgtgaaggccggcggcatcggctacgagctcaaggtgtccggcgcg
aacgaggaggtcatcgaggccaggcacgtgatcgtcgccaccggctccaacgcccgcgcg
ctgccgggcgtgccgttcgacgagcagaacgtcctgtccaacgacggtgcgctgcgcatc
cccgaggtgccgaagaagctgggcgtgatcggctccggcgtcatcggcctggagatgggc
tcggtgtggcgccgcctgggcgccgacgtgaccatcctcgaggcactgccgaccttcctg
ggcgctgccgacgagcaggtcgccaaggaggcgctcaaggtcttcaccaagcagggcctg
aagattcagctgggcgtgaaggtcaacgaggtcaagaacggcgccaagggcgtgaccgtc
agctacaccgacgccaagggcgaggcccagacgctggaggtcgacaagctgatcgtctcg
atcggccgcgtgcccaacaccaacggcctgaacccggaagccgtgggcctgaagctcgac
gagcgcggcgccatcgtggtcgacgaccagtgccgcaccaacctgcccaacgtctgggcg
gtgggtgacgtggtgcgcggcccgatgctggcgcacaaggccgaggaagagggcgtggcg
gtggccgagcgcatcgccggccagcacggtcacgtgaacttcgacaccatcccgtgggtg
atctacaccagccccgagatcgcctgggtcggcaagaccgagcagcagctcaaggccgaa
ggccgcgcctacaaggccggcagcttcccgttcatggccaacggccgcgcccgtgcgctc
ggcgacaccaccggcttcgtcaagttcctggccgatgccaagaccgacgagatcctcggc
gtgcacatcatcgggccgtacgcgtccgagctgatcgccgagagcgtggtggcgatggag
ttcaaggccagcgccgaggacatcgcccgcatctgccacgcgcacccgtcgctcagcgag
gccaccaaggaggcggcgctggcggtggacaagcgcacgctgaacttctga

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