Caldimonas thermodepolymerans: IS481_10005
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Entry
IS481_10005 CDS
T06911
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm00010
Glycolysis / Gluconeogenesis
sthm00020
Citrate cycle (TCA cycle)
sthm00260
Glycine, serine and threonine metabolism
sthm00280
Valine, leucine and isoleucine degradation
sthm00310
Lysine degradation
sthm00380
Tryptophan metabolism
sthm00620
Pyruvate metabolism
sthm00630
Glyoxylate and dicarboxylate metabolism
sthm00640
Propanoate metabolism
sthm00670
One carbon pool by folate
sthm00785
Lipoic acid metabolism
sthm01100
Metabolic pathways
sthm01110
Biosynthesis of secondary metabolites
sthm01120
Microbial metabolism in diverse environments
sthm01200
Carbon metabolism
sthm01210
2-Oxocarboxylic acid metabolism
sthm01240
Biosynthesis of cofactors
Module
sthm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sthm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sthm_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
sthm_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
IS481_10005 (lpdA)
00020 Citrate cycle (TCA cycle)
IS481_10005 (lpdA)
00620 Pyruvate metabolism
IS481_10005 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
IS481_10005 (lpdA)
00640 Propanoate metabolism
IS481_10005 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IS481_10005 (lpdA)
00280 Valine, leucine and isoleucine degradation
IS481_10005 (lpdA)
00310 Lysine degradation
IS481_10005 (lpdA)
00380 Tryptophan metabolism
IS481_10005 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
IS481_10005 (lpdA)
00670 One carbon pool by folate
IS481_10005 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sthm04147
]
IS481_10005 (lpdA)
Enzymes [BR:
sthm01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
IS481_10005 (lpdA)
Exosome [BR:
sthm04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
IS481_10005 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
AlaDh_PNT_C
FAD_binding_2
FAD_oxidored
HI0933_like
NAD_binding_8
GIDA
FAD_binding_3
Amino_oxidase
3HCDH_N
Thi4
2-Hacid_dh_C
zf-UBP
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
QPC30143
LinkDB
All DBs
Position
complement(2138807..2140237)
Genome browser
AA seq
476 aa
AA seq
DB search
MSNKQFDVVVIGGGPGGYIAAIRAAQLGFNTACIDEWKNAKGGPAPGGTCTNVGCIPSKA
LLQSSEHYEQAGHHFAEHGISLSNLSMDVAKMLARKDAVVKQNNEGILYLFKKNKVTFFH
GRGSFVKAGGIGYELKVSGANEEVIEARHVIVATGSNARALPGVPFDEQNVLSNDGALRI
PEVPKKLGVIGSGVIGLEMGSVWRRLGADVTILEALPTFLGAADEQVAKEALKVFTKQGL
KIQLGVKVNEVKNGAKGVTVSYTDAKGEAQTLEVDKLIVSIGRVPNTNGLNPEAVGLKLD
ERGAIVVDDQCRTNLPNVWAVGDVVRGPMLAHKAEEEGVAVAERIAGQHGHVNFDTIPWV
IYTSPEIAWVGKTEQQLKAEGRAYKAGSFPFMANGRARALGDTTGFVKFLADAKTDEILG
VHIIGPYASELIAESVVAMEFKASAEDIARICHAHPSLSEATKEAALAVDKRTLNF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaagcaattcgacgtcgtcgtcatcggcggcggcccgggcggctacatcgcc
gccatccgtgcggcgcagctgggcttcaacacggcctgcatcgacgagtggaagaacgcc
aagggcggtcccgccccgggcggcacctgcaccaacgtcggctgcatcccgtccaaggcg
ctgctgcagtcgtccgagcactacgagcaggccggccatcactttgccgagcacggcatc
tcgctgtccaacctgtcgatggacgtggcgaagatgctggcccgcaaggatgcggtcgtg
aagcagaacaacgaaggcatcctgtacctgttcaagaagaacaaggtgaccttcttccac
ggccgcggctcgttcgtgaaggccggcggcatcggctacgagctcaaggtgtccggcgcg
aacgaggaggtcatcgaggccaggcacgtgatcgtcgccaccggctccaacgcccgcgcg
ctgccgggcgtgccgttcgacgagcagaacgtcctgtccaacgacggtgcgctgcgcatc
cccgaggtgccgaagaagctgggcgtgatcggctccggcgtcatcggcctggagatgggc
tcggtgtggcgccgcctgggcgccgacgtgaccatcctcgaggcactgccgaccttcctg
ggcgctgccgacgagcaggtcgccaaggaggcgctcaaggtcttcaccaagcagggcctg
aagattcagctgggcgtgaaggtcaacgaggtcaagaacggcgccaagggcgtgaccgtc
agctacaccgacgccaagggcgaggcccagacgctggaggtcgacaagctgatcgtctcg
atcggccgcgtgcccaacaccaacggcctgaacccggaagccgtgggcctgaagctcgac
gagcgcggcgccatcgtggtcgacgaccagtgccgcaccaacctgcccaacgtctgggcg
gtgggtgacgtggtgcgcggcccgatgctggcgcacaaggccgaggaagagggcgtggcg
gtggccgagcgcatcgccggccagcacggtcacgtgaacttcgacaccatcccgtgggtg
atctacaccagccccgagatcgcctgggtcggcaagaccgagcagcagctcaaggccgaa
ggccgcgcctacaaggccggcagcttcccgttcatggccaacggccgcgcccgtgcgctc
ggcgacaccaccggcttcgtcaagttcctggccgatgccaagaccgacgagatcctcggc
gtgcacatcatcgggccgtacgcgtccgagctgatcgccgagagcgtggtggcgatggag
ttcaaggccagcgccgaggacatcgcccgcatctgccacgcgcacccgtcgctcagcgag
gccaccaaggaggcggcgctggcggtggacaagcgcacgctgaacttctga
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