Caldimonas thermodepolymerans: IS481_11185
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Entry
IS481_11185 CDS
T06911
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
sthm
Caldimonas thermodepolymerans
Pathway
sthm00260
Glycine, serine and threonine metabolism
sthm00630
Glyoxylate and dicarboxylate metabolism
sthm00670
One carbon pool by folate
sthm00785
Lipoic acid metabolism
sthm01100
Metabolic pathways
sthm01110
Biosynthesis of secondary metabolites
sthm01200
Carbon metabolism
Module
sthm_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sthm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IS481_11185 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IS481_11185 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
IS481_11185 (gcvP)
00670 One carbon pool by folate
IS481_11185 (gcvP)
Enzymes [BR:
sthm01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
IS481_11185 (gcvP)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
HTH_31
RRM
Motif
Other DBs
NCBI-ProteinID:
QPC30345
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Position
2390039..2392942
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AA seq
967 aa
AA seq
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MLTSASVPLSDLEAHDDFVERHIGVTPADEAHMLSVIGAASRAALIDTVVPASIRRSSAM
NLPPPASEAEALRELKAIASRNRVLKSFIGQGYHGTHLPGVILRNVLENPAWYTAYTPYQ
AEISQGRMEALINFQTMVSDLTGLAIANASMLDEATAAAEAMTLAARAGKSKSNVFYVAA
DVLPQTLEVVRTRARPLGIEVRVFGGDEPLQDDSFAVLLQYPGVDGAVRDWREWIAAYHA
RGGLVLMAADLLALTLLVPPGELGADIALGTTQRFGMPMGNGGPHAAYLACKDEFKRSMP
GRLVGVSIDAHGHTAYRLALQTREQHIRREKATSNICTAQVLPAVIASMYAVYHGPQGLK
RIAQRVASYTAILAQGLRQLGWTLRHDTAFDTVTVQTDGKTDTILVDATGRGMNLRRAAP
DAVGISLDETTTREDIVALWEVFAEVKAQGQALPSFGQFEQGVATLLPPALLRSSPYLTH
PVFNSYHSETEMLRYLRALADKDLALDRTMIPLGSCTMKLNATSEMIPITWPEFADVHPF
APRDQLAGYELLDQQLQQWLCQATGYAGASLQPNAGSQGEYAGLLVIKAYHEARGEAHRN
VCLIPESAHGTNPASAQMAGMKVVVVRCDRDGNVDLDDLRAKCGQHARELAAVMITYPST
HGVFEARVKELCEIVHAHGGRVYVDGANMNALVGIAAPGEFGGDVSHLNLHKTFCIPHGG
GGPGVGPVCVVEDLVPFLPGHRTAGLGAGTQVGAVSAAPLGNASVLPISWMYLRMMGAQG
LRAATEAAILNANYIAARLQDHYPILYHGGTALKGGGVAHECILDLRPLKESAGVTAEDV
AKRLIDYGFHAPTLSFPVAGTLMVEPTESESLAELDRFCDAMIAIREEIRRIEQGQWPRD
DNPLKHAPHTAEALVAAEWSHAYTREEAAYPVPALRRRKYWAPVGRIDNVYGDRNLFCSC
VPVSEYK
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgtccgcctccgtgcccctgagcgacctcgaagcccacgacgatttcgtcgaa
cgccacatcggcgtcacgcccgccgacgaagcccacatgctgtcggtgatcggcgccgcc
tcgcgggccgcgctgatcgacaccgtggtgcccgcctcgatccgccgcagctccgcgatg
aacctgccgccgccggcctccgaggccgaggcgctgcgcgagctcaaggccatcgccagc
cgcaaccgcgtgctcaagagcttcatcggccagggctaccacggcacgcacctgccgggc
gtcatcctgcgcaacgtgctcgagaaccccgcctggtacaccgcctacacgccctaccag
gccgagatctcgcagggccgcatggaagcgctgatcaacttccagaccatggtcagcgac
ctcaccgggctggcgatcgccaacgcctcgatgctggacgaggccaccgccgcggccgag
gcgatgacgctggccgcgcgcgcgggcaaatcgaagtcgaacgtgttctacgtcgccgcc
gacgtgctgccgcagacgctggaggtggtgcgcacccgcgcgcgcccgctgggcatcgag
gtgcgcgtgttcggtggtgacgagccgctgcaggacgacagcttcgcggtgctgctgcag
tacccgggcgtcgacggcgcggtgcgcgactggcgcgaatggatcgccgcctaccacgca
cgcggcggcctggtgctgatggcggccgacctgctggcgctgacgctgctggtgccgccg
ggagagctgggcgccgacatcgcgctgggcaccacgcagcgcttcggcatgccgatgggc
aatggcggcccgcacgccgcctacctcgcgtgcaaggacgaattcaagcgctcgatgccc
ggccggctggtgggcgtgagcatcgacgcgcacggccacaccgcctatcgcctcgcgctg
cagacgcgcgagcagcacatccgccgcgagaaggccacctccaacatctgcaccgcgcag
gtgctgccggcggtgatcgccagcatgtacgcggtctaccacggcccgcagggcctgaag
cgcatcgcgcaacgcgtggccagctacaccgccatcctggcccaggggctgcgccagctg
ggctggacgctgcgccacgacaccgcgttcgacaccgtcacggtgcagaccgacggcaag
accgacaccatcctggtcgacgcgaccggccgcggcatgaacctgcgccgtgcggcgccc
gacgcggtgggcatctcgctggacgagaccaccacgcgcgaggacatcgtcgcgctgtgg
gaggtgttcgccgaggtgaaggcccagggccaggcgctgccctcgttcgggcagttcgaa
cagggcgtggcgacgctgctgccacccgcgctgctgcgcagcagcccgtacctgacgcac
ccggtcttcaacagctaccactccgagaccgagatgctgcgctacctgcgcgcgctggcg
gacaaggacctggcgctggaccgcacgatgatcccgctcggctcgtgcaccatgaagctc
aacgcgaccagcgagatgatccccatcacctggccggagttcgccgacgtgcacccgttc
gcgccgcgcgaccagctggccggctacgagctgctggaccagcagctgcagcagtggctg
tgccaggccaccggctatgccggcgcgtcgctgcagccgaacgccggctcgcagggcgag
tacgccgggctgctggtcatcaaggcctaccacgaggcgcgcggcgaggcgcaccgcaac
gtctgcctgatccctgaatcggcgcacggcaccaacccggccagcgcccagatggccggc
atgaaggtggtggtggtgcgctgcgaccgcgacggcaacgtcgacctcgacgacctgcgc
gcgaagtgcgggcagcacgcccgcgagctggcggcggtgatgatcacctacccgtccacg
cacggcgtgttcgaggcgcgcgtcaaggagctgtgcgagatcgtgcacgcccatggcggg
cgcgtctacgtggacggcgcgaacatgaacgcgctggtcggcatcgccgcgccgggcgag
ttcggcggcgacgtctcgcacctgaacctgcacaagaccttctgcatcccgcacggcggt
ggtggcccgggcgtcggcccggtgtgcgtggtcgaggacctggtgcccttcctgcccggt
caccgcacggccggcctgggcgccggcacccaggtcggcgcggtcagcgccgcgccgctg
ggcaacgcctcggtgctgcccatctcctggatgtacctgcgcatgatgggtgcgcagggg
ctgcgcgccgccaccgaggccgcgatcctgaacgccaactacatcgccgcgcgcctgcag
gaccactaccccatcctctaccacggcggcaccgcgctcaagggcggcggcgtcgcgcac
gagtgcatcctggacctgcgcccgctgaaggagtcggccggcgtcaccgccgaggacgtg
gccaagcgcctgatcgactacggcttccacgcgccgacactgagcttcccggtggccggc
acgctgatggtcgaaccgaccgaaagcgagtcgctggccgagctggaccgcttctgcgac
gcgatgatcgcgatccgcgaggagatccgccgcatcgagcagggccagtggccgcgcgac
gacaacccgctcaagcacgcgccgcacacggccgaggcgctggtggcggccgagtggagc
cacgcctacacccgcgaggaagccgcctacccggtgccggcgctgcgccgccgcaagtac
tgggcgccggtcggccgcatcgacaacgtctacggcgaccgcaacctgttctgcagctgc
gtgccggtgtccgagtacaagtaa
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